| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0560 |
|---|
| Symbol | |
|---|
| ID | 4654198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 636482 |
|---|
| End bp | 637864 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639810512 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_957848 |
|---|
| Protein GI | 120553497 |
|---|
| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0528285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCTG CTAAAACACA GGCAATCCTG TTACTGACCG CCTATTTTTC CAGGTCAACA
AGCTCAGAAG CAAAGCCTCT CACGAATAAA GAGTGGGGGC GTTTTGCCTT CTGGTTGAAG
AACCAGGAAA TGGTCCCCGA GGATCTCCTG ACAGGGGACC TCAGTCAAAA ACTGGCGGGA
TGGACAGACT CCAAGATTAC ATCCGACCGC ATTCAAACCC TGCTCAATCG TGGGTCCGCC
CTGGCAATGG CGATGGAAAA ATGGACCCGC TCCGGCTTAT GGGTGTTGAC GCGCTCAGAC
AGTGACTACC CCAAACGTCT TAAAGCACGC CTCGGTAATG ATGCACCCCC TGTCTTCTTC
GGGTGTGGCA ACCGCAATCT CTTGAACCAA GGTGGCATTG CTGTCATCGG CTCCCGTAAG
ACATCTGACG CGGATCTTCA GTTTAGCCAC GATCTTGGAG CTAAGTCCGC AAACGATGGG
CGATCTGTCG TATCCGGCGG TGCAAAAGGC GTCGATGAAG CCGCCATGCT GGGTGCCCTT
GAATCTGAAG GTACGGCAAT TGGGGTTCTC GCCAATGACC TGCTGCGCGC CGCCACCTCC
GCAAAGTACA GAAAGTACCT GATGGCGAAC AATCTGGTTC TCCTCTCACC CTTTTATCCT
GAGGCCGGTT TCAATGCGGG CAATGCTATG CAGCGCAACA AGTACATCTA TTGCCTGTCG
GATGCAGCCA TTGCTGTGCA TTCCGGAAAC TCAGGTGGAA CCTGGAACGG GGTGTTAGAA
AACATAAAGC ACAACTGGGT ACCCATGTGG ATCAAGCCTA CCGACGACCC GGAGGCCGGC
AATGCCACAC TGGTGCAAAA AGGTGCTAAA TGGCTACCTG AAAATCTCGC TGAAATCGAC
CTTGACCACT TGCTGCGAAC CGCAGATTCA TCTGCAGAAC AGGGTGCTGA TTTATTTGCT
CAAAACCGGA CAGAAACCGT GCCCGAGGTA ACTGTAAACG AACCTCTGGC TCACACGACG
GGCCAACAAG AAGAAAACGA AGTAGCGTCG AATGAGGTTG TCAAAGAGAC TGCTGAAGAC
GCTTCCAAGT CTTCACCGAA GCAGGAACAC GCAACCCCCT CGCCGGTTTC GAGTGACCAA
TGCGAAGAAA AAACAGCTCT TACGCAGCTT TCCTTGTACG ACCACTTTCT CCTGATGCTT
AGAAATGAAA CAGGCTCACC AAAAACCATT GATGAATTGT TGGAAGCTAC ACAGCTTCAC
AAAACCCAGC TTAACGAATG GTTAAAACAG GCTGTCGCGG ATGACAAGGT GACCAAGTTA
AATCGCCCGG CTCGGTATCA GTGGGTGGAA GACAATCAAC GCAAGATGTT CGAGGATCAG
TAG
|
|---|
| Protein sequence | MLAAKTQAIL LLTAYFSRST SSEAKPLTNK EWGRFAFWLK NQEMVPEDLL TGDLSQKLAG
WTDSKITSDR IQTLLNRGSA LAMAMEKWTR SGLWVLTRSD SDYPKRLKAR LGNDAPPVFF
GCGNRNLLNQ GGIAVIGSRK TSDADLQFSH DLGAKSANDG RSVVSGGAKG VDEAAMLGAL
ESEGTAIGVL ANDLLRAATS AKYRKYLMAN NLVLLSPFYP EAGFNAGNAM QRNKYIYCLS
DAAIAVHSGN SGGTWNGVLE NIKHNWVPMW IKPTDDPEAG NATLVQKGAK WLPENLAEID
LDHLLRTADS SAEQGADLFA QNRTETVPEV TVNEPLAHTT GQQEENEVAS NEVVKETAED
ASKSSPKQEH ATPSPVSSDQ CEEKTALTQL SLYDHFLLML RNETGSPKTI DELLEATQLH
KTQLNEWLKQ AVADDKVTKL NRPARYQWVE DNQRKMFEDQ
|
|---|
| |