| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0030 |
|---|
| Symbol | |
|---|
| ID | 4656240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 45550 |
|---|
| End bp | 46857 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639809986 |
|---|
| Product | restriction modification system DNA specificity subunit |
|---|
| Protein accession | YP_957325 |
|---|
| Protein GI | 120552974 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.534213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGCC AACTTCTTCC AGCAAATTGG CAACTGGCCA ACCTTGGAGA GATATCTTCC
GATATTTCCT ATGGTTACAC TGCGTCGGCA ACCTCTGAGC CAACAGGGGT AAAGCTTCTG
CGCATCACAG ATATACAAAA CAATACTGTG AGCTGGCCAA ACGTTCCGAA CTGCAAAATA
GAACCCGAGA AAGTTGGTAA ATACAGACTG AAACCGAGCG ATCTTGTTTT TGCTAGGACC
GGCGCTACCG TTGGCAAAAG CTATCTTCTA AAAGGCGAGA TTCCGGAATC TGTTTATGCA
TCATATCTAA TCCGCGTCCG CTGCTTGGAA GGTGTCTCAA TAGAATTTTT GGCCAACTAT
TTTCAATCTC CATATTACTG GCGCCAAATC ACGGACTTCA GTGCAGGAAT CGGACAGCCA
AACGTTAACG GTACAAAGCT GAAAAACCTT TCGGTGCCGG TACCCCCCCT CGCCGAACAA
AAAGTCATCG CCGACAAACT CGACACCCTG CTGGCCCAGG TGGAAAACAC CAAAGCCCGC
CTCGAGCGCA TCCCGCAAAT CCTCAAACGC TTCCGCCAGT CCGTGCTGGC TGCGGCGGTG
AGTGGACGGT TGATTGATGC CCAACCCGAA TCAATAGCTA AGTTGGAAGA ATTAGTCGAT
ATTGAAAACG GAGCTAGAAA ACCCGTATCT GCGACGATAC GTAAAACCAT TCAGGGGACG
ATCCCTTATT ATGGAGCGAC TGGAATTGTC GATTACCTCA ATGACTATAC TCATGAAGGT
CGCTACCTAT TGGTTGGCGA AGACGGCGCA AACCTCCTGA GTAAATCAAA AGATCTTGCG
TTCATAGTGG AAGGGAAAAT GTGGGTTAAC AACCATGCTC ACGTTTTGAA AGAACGACCG
GGAGTGAACT TAGATTTCGT GAAGATCGCA ATCAACTCTC TCGACTTAAC CCCATGGATT
ACCGGGTCCG CACAACCGAA ACTTACGAAA AAGTCACTCT GTGGTTTGCC TATTACTAAC
TTTACCCTCG ATGAACAAAC CGAAATCGTC CGCCGAGTAG ACCAACTCTT CTCCCACGCC
GACCGCATCG AACAACAGGC CAGCAGCGCC CTGGCCCGCG TCAACAACCT CACCCAGTCC
ATCCTCGCCA AGGCCTTCCG GGGCGAACTC ACCGAGCAAT GGCGCAGGGA CAATCCGGAG
CTGATCGGCG GGGAGAACAG TGCGGAGGCG TTGCTAGAGC GGATCAAGGC AGAGCGGGCA
GCAATGAAGC CGGTGAAGAG AACCCGCAAC AAACGGACTA CCGTTTAA
|
|---|
| Protein sequence | MQSQLLPANW QLANLGEISS DISYGYTASA TSEPTGVKLL RITDIQNNTV SWPNVPNCKI
EPEKVGKYRL KPSDLVFART GATVGKSYLL KGEIPESVYA SYLIRVRCLE GVSIEFLANY
FQSPYYWRQI TDFSAGIGQP NVNGTKLKNL SVPVPPLAEQ KVIADKLDTL LAQVENTKAR
LERIPQILKR FRQSVLAAAV SGRLIDAQPE SIAKLEELVD IENGARKPVS ATIRKTIQGT
IPYYGATGIV DYLNDYTHEG RYLLVGEDGA NLLSKSKDLA FIVEGKMWVN NHAHVLKERP
GVNLDFVKIA INSLDLTPWI TGSAQPKLTK KSLCGLPITN FTLDEQTEIV RRVDQLFSHA
DRIEQQASSA LARVNNLTQS ILAKAFRGEL TEQWRRDNPE LIGGENSAEA LLERIKAERA
AMKPVKRTRN KRTTV
|
|---|
| |