Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_0789 |
Symbol | |
ID | 5327094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | - |
Start bp | 812798 |
End bp | 815464 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640788180 |
Product | DNA-directed RNA polymerase subunit A' |
Protein accession | YP_001324984 |
Protein GI | 150401218 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.804481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGAT ATGACATTCC AAAAGAAATC GGGGGAATAG TATTTGGTTT ATTATCTCCA GAATATATCC GAAAAATTTC AGTAGCGAAA ATTGTAACTG CTGATACTTA TGATGATGAT GGATACCCCA TAGATGGAGG TTTAATGGAT ACTAGATTGG GAGTAATAGA TCCGGGTCTT GTATGTAAAA CCTGCGGGGG AAGGGTAGGA ACATGCCCTG GTCATTTTGG ACATATTGAG TTATCAAAAC CTGCTGTCCA TATCGGGTAT GCAAAAGACA TATACAAAAT ACTAAAGGCT GTATGTCCGC ACTGTGGAAA GGTGGCTTTA AGTGAAACCA GAAGAATGGA ATACCTTAAA AAAATGGAAA CTTTAGAAGA AGAAGGCGGA GATAAATGGC AATTGGCTGA CGATGTGTTA AAAGAAGGGG CCGGAAAAGA TATCTGCCCG TACTGTGGCG AAACTAAATA TGATATAAAA TATTCTAAAC CAACGGCTTA TTTGCAGATA GAAGGAAAAA CCCAAAAACA ACTGATGTCT TCAGAAGTTA GAGAAATTCT AGAAAAAATA CCTGATGAAG ATTGTATGTT AATAGGTGTT AATCCAGAAG TAGCAAGACC TGAATGGATG ATTTTAACAA GCCTACCTGT GCCACCAGTT ACAGTTAGGC CTTCTATTAC GCTTGAAAGT GGGGAACGAA GTGAGGACGA TTTAACCCAT AAATTAGTTG ATATTATCAG AATTAACCAG AGGTTAGACG AAAATATTGA GGGAGGAGCT CCTAACTTAA TTATTGAAGA CCTTTGGGAT TTATTACAAT ACCACATAAA TACCTACTTT GATAATGAAG CACCTGGAAC ACCTCCCGCA CGACATAGAA GTGGAAGACC GCTCAGAACT ATTGCTCAAA GGTTAAAAGG TAAAGAAGGT AGATTTAGGC ATAATCTTGC AGGTAAAAGG GTAAATTTCT CAGCAAGGAC CGTTATTTCG CCCGACCCAA GATTAAGTAT AAATGAAGTA GGTATTCCAA AGCAAATAGC AAAAGAATTA ACCATTCCTG AGAAGGTCAC AAAATACAAT ATTGATAAAA TAAGGGAGCT CATAGCAAAT GGTGCAGATA ATCACCCTGG TGTTAACTAT CTTATCAAAA AAGTAAAGAC AAGAGATGGA AAGGAAGAAG AATATAAAAT AAAAATAACT GATAAAGTTA AAGAACTTTG GTCGGAAAAA GTGGAAGAAG GAATGATTGT CGAGAGACAT TTAATTGATG GAGATATTGT ATTATATAAC AGGCAACCTT CATTACACAG AATGTCAATT ATGGCACACC GGGTAAAAGT TTTGCCGTAT AGGACATTTA GACACAATCT TTGTGTATGT CCGCCTTACA ATGCTGACTT CGATGGAGAT GAAATGAACA TACATGTTCC TCAATCAGAA GAGGCTAGAG CAGAGGCTGA GGCAATAATG CTTGTAGAAA ATCATATTGT TTCTCCCAGA TATGGTGGTC CAATTATTGG GGCAATTCAC GATTTCATAT CCGGGGCATA TGTGTTAACA AGTTCCTACT TTACAAAAGA TGAAGCTTCA ATATTGTTAA GAAGTGCCAA TCTTGAAATG GATTTGGGAG CTCCTGATAA AATTGAAGAT GGAGTAGAAT TATACAGCGG AAGAACACTA TTTTCTAAAA CACTTCCTAA GGAATTAACT CTAAAATATA GGGCAAAAAC TTGTAAAAAA TGTGAAATTT GTGAAAAAGA AGACTGCCCT CATGATTCCT ATGTGGTAAT AATAAATGGG GAGCTCCTGA AAGGAGTTAT TGATAAAAAT GGATATGGTT CTGAGGCAGG AATTATATTA AATACCCTAG TTAAAGAATT TGGTTCAGAA CAAGCAAGAA TATTCCTTGA TACTTCAACA AAAATGTCCA TAAAATCCAT GATGATAAAA GGTTTTACAA CTGGTATTGA CGATGAAGAT ATTTCAGAAG AGTCTGTTGA GGAAATAAAG GCGACTTTGG ATAAAGCAGA AAAAGAAGTT GAAGAAATAA TTAAAGAATA TGAAAACGGA ACACTTGAAT TACTGCCTGG AAGAAGCCCA GAAGAATCAA GGGAAGCATA TATTATGCAG GTATTGGGTA AGGCTAGGGA TGATGCAGGT AAGGTTGCTG AACGAAATTT AAGTAAAACA AACCATGCAG CAGTAATGGC AAGGACCGGT GCAAGAGGTT CATTGTTGAA TATTACAATG ATGGCCGGTT GTGTTGGTCA GCAGGCAGTT AGGGGAGGAA GAATATTTAG GGGATACAGA GATAGAACGC TACCTCACTT CGAAAAAGGA AGTTTATCCG CAGAATCCCA CGGTTTCGTT AGGAGTTGCT ATAAAACAGG TATGACGCCC ACAGAATACT TCTTCCACGC CATGGGGGGA AGAGAAGGAT TAGTGGACCA GGCTGTTAGG ACGGCACAAT CTGGATACAT GCAAAGAAGA TTGGTAAATG CTCTTCAAGA CCTAAAAGTA GAATATGATA CATCTGTAAG AGATTCAAAA GGGATGATTG TTCAATTTAC CTACGGGGAT GATGGAGTAG ACCCTGCAAA GGCCGACCAT GGAAAATCTG TGGATTTAGA CAAAATATTT ACAAAAGTTA AGTCAAAATA TGAATAA
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Protein sequence | MDRYDIPKEI GGIVFGLLSP EYIRKISVAK IVTADTYDDD GYPIDGGLMD TRLGVIDPGL VCKTCGGRVG TCPGHFGHIE LSKPAVHIGY AKDIYKILKA VCPHCGKVAL SETRRMEYLK KMETLEEEGG DKWQLADDVL KEGAGKDICP YCGETKYDIK YSKPTAYLQI EGKTQKQLMS SEVREILEKI PDEDCMLIGV NPEVARPEWM ILTSLPVPPV TVRPSITLES GERSEDDLTH KLVDIIRINQ RLDENIEGGA PNLIIEDLWD LLQYHINTYF DNEAPGTPPA RHRSGRPLRT IAQRLKGKEG RFRHNLAGKR VNFSARTVIS PDPRLSINEV GIPKQIAKEL TIPEKVTKYN IDKIRELIAN GADNHPGVNY LIKKVKTRDG KEEEYKIKIT DKVKELWSEK VEEGMIVERH LIDGDIVLYN RQPSLHRMSI MAHRVKVLPY RTFRHNLCVC PPYNADFDGD EMNIHVPQSE EARAEAEAIM LVENHIVSPR YGGPIIGAIH DFISGAYVLT SSYFTKDEAS ILLRSANLEM DLGAPDKIED GVELYSGRTL FSKTLPKELT LKYRAKTCKK CEICEKEDCP HDSYVVIING ELLKGVIDKN GYGSEAGIIL NTLVKEFGSE QARIFLDTST KMSIKSMMIK GFTTGIDDED ISEESVEEIK ATLDKAEKEV EEIIKEYENG TLELLPGRSP EESREAYIMQ VLGKARDDAG KVAERNLSKT NHAAVMARTG ARGSLLNITM MAGCVGQQAV RGGRIFRGYR DRTLPHFEKG SLSAESHGFV RSCYKTGMTP TEYFFHAMGG REGLVDQAVR TAQSGYMQRR LVNALQDLKV EYDTSVRDSK GMIVQFTYGD DGVDPAKADH GKSVDLDKIF TKVKSKYE
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