Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_0026 |
Symbol | |
ID | 5327186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | + |
Start bp | 27044 |
End bp | 29605 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640787421 |
Product | DNA topoisomerase I |
Protein accession | YP_001324231 |
Protein GI | 150400465 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATT TAATAATCTG CGAAAAACCG AATGTATCAA AAAAAATAGC CGATGCTCTT GGAAAACCTA AAAAGAAATC AAATGATGGG GTTCCATATT ATGAAATAGA ACGAAATGGA AAAAAAATAA TTGTAGCATC TGCTGTTGGT CATTTATATA CATTAGAGGA GAAAAAATCC GACGAAAAAG GAAAAAATAA AGGAAGAAAT AGCTTTGGGA GATATCCTAT TTTTGATATA AGGTGGGTGC CAGCTTCTAC AATAAAAGGA AAGGAATATG TTCAAAAATA CATAAATACA TTAAATAAAT TATCTAAGAA ATCAAATGAT TATTATATTG CTTCGGATTG GGATATTGAG GGGGAATTAA TAGGTTATCA TGCACTACGA TATTGTTGTA ATGAGGATAA CGCAAAAAGA ATGAGATTTT CATCACTTAC TAAAAAGGAT ATTATTAAAG CATATGAGCA ACCCGATAAT ATAGATTTTG GGCTTGTTGA TGCAGGGGAT ACAAGGCATA GATTAGATTG GTATTATGGT ATCAATATGT CTGTGGCACT GATGCAATGT ATAAGGTCAG TCAATAGATG GCATACAATG AGTACAGGGA GGGTTCAAGG TCCAGCATTA TCTTTTTTAG TGGATAGGGA GCTTGAAATA AGAAAATTTG TGCCTGTGCC ATACTGGGTA ATAGATGCAA ATTTAAAAGA TGGATTGATA GCAATACATG AAAAAGATAA ATTTTGGGAC GAAAAGGAAG CTAACACAAT TTACAACAAA ATAAAAGACG AGAAGGAAGC AATTGTAGCA AATGTTAAAA AAACTAAAAA AACAATTAAA CCTAATCCGC CATTTGATTT GGGGGCTCTC CAAAGAGAGG CACATAGAAT ATTTAAATTC TCACCAAAGA AAACTCAGGA AATCGCTCAG AAATTGTATG AAAAGGCAAT TTGTTCATAT CCAAGAACAA GCTCCCAAAA ACTTCCAAAA GATGATAATT ATATTAATGA CATATTAAAT AAAGTTGTAA ATCATAATAT ATATGGAAAA TACGCAAAAT CTATAATTGA GGAAGGAAGG AAACCTATTG AGGGGAAAAA GGACGACCCA GCTCACCCCG CAATTCATTT TGTGGATACT CCAAAAGAGG AGCTCCCACC AGAGGAACAA AAATTATATG ATTTAATTGT AAGAAGAACT CTTGCCGTAT TTTGGGATAA TGCTGAAAGA GAATATAGCA ATATATCGTT GGACATAGGA GGGGAGATTT TTAAACTTAG TGGCTCACGA ACCATTAAAG AAGGTTGGCA TGAAATATAT TATTTCACTA AATTTGATGA GACGGAGCTC CCTGCCCTAA GAAAAAATAA TAAAATTGTC GTAGAAAAAA TCAATATTGA GGAAAAGGAG ACCAAACCGC CAAAAAGATA TACAATGTCT TCAATTATTA AAGAGCTTGA AAATAGGGAG CTTGGAACAA AATCCACCCG AGCTGACATT GTAGAAAAAT TGGTAAAAAG AGGCTACTTA ATAGAGGATA ATTCTTTAAC TGTGACGGAT TTAGGTATTG GAGTAATAGA AGTTCTTAAA AAATACTGTC CCGAGATTAT AGACGAGCAA ATGACAAGAG AGCTTGAAAA GAAATTGGAT AGATTGCAAA AAAGAACCAT AAAAAAAGAA ACAGTTTTAA AGGATGCCGA AAAGAAATTA ACGGCGATAC TTAATGAAGT TAAGAAAAAG GAAAAAGAAA TAGGGGCTGA ATTGGTTGAA AAAGTAGATG CCACAAATAA AACACTTCAA ACCATAGGTA AATGTGAATG TGGAGGGGAT TTGGGAATAA TCAGAATAAA AAATAAAAGA AGATTTGTAG GTTGCTCTAA CTATCCAGAA TGCACCATTG CATACCCATT ACCTGCCAAG GGAAGAATTA AAATACCAAA TGAAGTTTGT GAGGTTTGTG GAAAACCTAT GTTATTAATT GATAATCAAA AACTTTGTGT AAATACAGAT TGTCCTTCAA AAATATCCGA AGAAGATAAA AAAGAATTGG AAAAATTGGA GAAAAGCGAA AAACCATGCC CAAAATGTGA TGGAACACTT ACAGTGAAAA AAGGAGTTTA TGGTGTATTT TTAGGTTGCT CTAACTATCC AAAATGTAAA TACACTGAAA AATTACATAG TAAGAAAGAA GATTCCGAAA TTACTGTTGT TGGTGAATGT CCAGACTGTG GAGGGGATTT GGTGATTAAA AAAGGTAGAT TTGGAGAATT TATAGCCTGT TCCAACTATC CAAAATGTAA GCACACTGAA AAGATTAAAA AAGATGGTAA AAGCAATGCC AAAGCCACCA AAACAGAAAA AACAGAAACT AAAACCACCA AAAAGAAATC CACAAAAGGA AGCACAACAA AGGAAAAGAA AAAACCAGAT AATTCAAACG AAGTTGGTGA ATGTCCAGAC TGTGGAGGGG ATTTGGTGAT TAAAAAAGGT AGATTTGGAG AATTTATAGC CTGTTCCAAC TATCCAAAAT GTAAGCACAC TGAAAAGATT AAAAAAGATT AA
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Protein sequence | MTDLIICEKP NVSKKIADAL GKPKKKSNDG VPYYEIERNG KKIIVASAVG HLYTLEEKKS DEKGKNKGRN SFGRYPIFDI RWVPASTIKG KEYVQKYINT LNKLSKKSND YYIASDWDIE GELIGYHALR YCCNEDNAKR MRFSSLTKKD IIKAYEQPDN IDFGLVDAGD TRHRLDWYYG INMSVALMQC IRSVNRWHTM STGRVQGPAL SFLVDRELEI RKFVPVPYWV IDANLKDGLI AIHEKDKFWD EKEANTIYNK IKDEKEAIVA NVKKTKKTIK PNPPFDLGAL QREAHRIFKF SPKKTQEIAQ KLYEKAICSY PRTSSQKLPK DDNYINDILN KVVNHNIYGK YAKSIIEEGR KPIEGKKDDP AHPAIHFVDT PKEELPPEEQ KLYDLIVRRT LAVFWDNAER EYSNISLDIG GEIFKLSGSR TIKEGWHEIY YFTKFDETEL PALRKNNKIV VEKINIEEKE TKPPKRYTMS SIIKELENRE LGTKSTRADI VEKLVKRGYL IEDNSLTVTD LGIGVIEVLK KYCPEIIDEQ MTRELEKKLD RLQKRTIKKE TVLKDAEKKL TAILNEVKKK EKEIGAELVE KVDATNKTLQ TIGKCECGGD LGIIRIKNKR RFVGCSNYPE CTIAYPLPAK GRIKIPNEVC EVCGKPMLLI DNQKLCVNTD CPSKISEEDK KELEKLEKSE KPCPKCDGTL TVKKGVYGVF LGCSNYPKCK YTEKLHSKKE DSEITVVGEC PDCGGDLVIK KGRFGEFIAC SNYPKCKHTE KIKKDGKSNA KATKTEKTET KTTKKKSTKG STTKEKKKPD NSNEVGECPD CGGDLVIKKG RFGEFIACSN YPKCKHTEKI KKD
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