Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_0013 |
Symbol | rpl10e |
ID | 5326844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | + |
Start bp | 15586 |
End bp | 16107 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640787408 |
Product | 50S ribosomal protein L10e |
Protein accession | YP_001324218 |
Protein GI | 150400452 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0197] Ribosomal protein L16/L10E |
TIGRFAM ID | [TIGR00279] ribosomal protein L10.e |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTAA GACCAAGTAA ATGTTATAGA GAAATTAATA AACCAGCATA CACAAGAAAA AAATATATTA GGGCTGTTCC ACAACCAAAA GTTGTTCATT ATGTTAATGG AAACAAAGGT GGAGATTTCC CTGTGGAAGT TCATTTAGTT GTTAAAGATG ATATTCAAAT AAGACATAAT GCATTGGAAT CAGCAAGGAT TGTAGGAAAT AAATACACTC AAAATAAATG CGGTAGATTG GGATACAAAT TCCAAATAAG AGTATATCCT CACCAAGTAT TGAGGGAAAA TAAAATGGCA TCAGGAGCTG GTGCAGATAG GATTTCCGAT GGAATGAGAT TATCATTCGG AAAAGCTGTT GGAACAGCTG CAAGAGTTAG AAAAGGGCAA AAAATTATTA CAATTTCAAC AACTCCTGAA AATGTAATAC ACGCAAAAGA AGCTTTAAGA AGATGCAACA TGAAAATGCC TGTAAAATGT AAAATAGTAA TTGGAAAGGG AGCAGAATTA GTAAAAAATT AA
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Protein sequence | MALRPSKCYR EINKPAYTRK KYIRAVPQPK VVHYVNGNKG GDFPVEVHLV VKDDIQIRHN ALESARIVGN KYTQNKCGRL GYKFQIRVYP HQVLRENKMA SGAGADRISD GMRLSFGKAV GTAARVRKGQ KIITISTTPE NVIHAKEALR RCNMKMPVKC KIVIGKGAEL VKN
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