| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0456 |
|---|
| Symbol | parC |
|---|
| ID | 3828405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | - |
|---|
| Start bp | 543485 |
|---|
| End bp | 546184 |
|---|
| Gene Length | 2700 bp |
|---|
| Protein Length | 899 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 23% |
|---|
| IMG OID | 637823612 |
|---|
| Product | DNA topoisomerase IV, A subunit |
|---|
| Protein accession | YP_424430 |
|---|
| Protein GI | 83319790 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01061] DNA topoisomerase IV, A subunit, Gram-positive |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.410296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATA AATCAGAAAT TATTTTATAT CCATTAGAAG AATTACTAGG TAATAGATTT
AGTAGATATG CAAAATATAT TATTCAAGAA AGAGCTTTAC CCGATGTTAG AGATGGATTA
AAACCAGTTC AACGCCGTAT TTTATATGCA ATGAACCAAT TGAATTTAAC ATTTGATAAA
CCTTATAAAA AATCAGCAAG AGTTGTTGGA GAAGTTATTG GTAAGTATCA CCCACATGGA
GATAGTTCTA TATATGATGC AATGGTTAGA ATGTCTCAGT GATGAAAAGT CAATATTCCA
CTAGTTGATA TGCAAGGAAA TAATGGATCA ATTGATGGAG ATAGCGCTGC TGCTATGCGT
TATACAGAAG CAAGACTTAC TAAAATTTCA AATCTTTTAT TAGAAGATTT AGAAAAAGAC
ACAGTTATAT TTTCACCAAA CTTTGATGAT AGTGAAACTG AACCAACAGT TTTACCTAGT
TATTTTCCAA ATATTTTAGT TAATGGAGCT ACTGGAATTG CTGCAGGTTA TGCAACAAAT
ATGCCTCCAC ACAATTTAAG TGAAATTATT GATGCAACTA TTGATATAAT TAAAAATCCA
AATATTACTA TTGATCAAAT TTTAAAAATA GTTAAAGGAC CTGATTTTCC AACTGGAGCT
ATTATTCAAA ATAAACAAGG AATAAGAGAA GCTTTTTTAA CAGGTAAAGG AAAAGTAATT
ATTAGTAGTA AATGACATCA AGAAAAAAAT AATATTGTAA TTGATGAAAT TCCATACGAA
GTAGTTAAAC AAGATCTTGT TAAAAAAATT GGTGATGTTA TTGATAATAA TCCTAATTTA
GGAATTAAAG AAATTAGAGA TGAAACTGAT AGAAAAGGTT TAAGAATAGT TATTGAATTA
AATGAAAAAG CTAACTTAGA AACTGTTAGA AAGTTTTTAT TTAAATCAAC TTGATTAAGT
GTTTCATATA ACTATAACAA TATTATTATT GTTGATAAAC AACCAAAACA ACTAGGTTTA
ATTGATATTA TTAAAGCTTA TATTTCTCAT TATAAAGAAG TATTTATTAA AAGAACTGAA
TTTAATTTAA ACAAAACAAA TCTAAGATTA GAAATTGTTA AGGGTTTAAT TAAAGCTTTA
TCAATTTTAG ATGAAGTTAT TAAAGTAATT AGAAAATCAG AAAATAGAAT TGATGCAATT
AATAATTTGG TTATAAGTTT TAACTTTACA ACAAATCAAT CAACAGCTAT TGTTGATATG
AGATTATATC GATTAACTTC AACTGATGTA AATAAATTAT TATTAGAAAA AACTGAACTA
ATCGATAAGA TTAAAAAATA TCAAGAAATT TTAAATGACA ATCTGGTTTT AGATAATGAG
ATCATTTCAA GACTAGAAGA AGTTAAAAAG CAATTTGGTA TAAAAAGAAA ATCTCAAGTT
GAAGATTTAG TTGAAGATTT AGATGTTGAT CAAAAAGAAG TAATAATTGA AAAAGAAATT
AATTTATGAA TTTCAAAAGA TGGTTATATT AAAGTTATTG ATAATAATAT TTTAAATAAA
AATGAATTAA GTTCTTTTGG TAAAAAACCA AATGATATGT GAATTAGTCA AGGGGTTTGT
TCAAATTTAG ATCATTTGAT TTTAATTTCA GATCAAGCTA ATTATTATTC AATTCCTTTA
TATAAAATTT CAACTAGTAA ATGAAAAGAA CAAGGTGTTC ATATAAACAG TGTTGCAACT
ACTCAACCAA ATGAAACTAT TATTAATGCT TTAGTAATTA AAGAATTTAT AAATTCTACT
CAACACTTAT TATTAGTTAC AAAAAATGGG TTAATTAAAA GAACTCAAAT TTCAGATTTA
GAAACTAAAA TTTTTAATAA ATCATTTAAG ATTATGAAAA TTAGTGATGA TGATAGTTTA
GTTTATGCAG ATTTGATTAG TTCTAAAACT TCATATTGTT GTATTGTTAC AAAAAATGGA
TATGCTGTTA GATATAATAT TGAAGATATT CCTATTCAAT CAACTATTTC AAAAGGAGTT
AAGGCTGCTA ATTTAAAAGA TGATCAAATT ATTAGTGCAT TAAGTTTACA AACTAATAAA
GATATAATTA TATTTACTAA TAAAAATAAT TATAAAAAAA TTGATCAAAA CTTAATTCCA
ATTTATATTA GACCAAAAAA AGGAATTAGA ATTTTAGTTG AAAAGAAAAA AAATAAAGAA
GAAGTTATTT TTAGTTTTGC AATTAATAAA GAAATGATTC TTTCTATTTT AGATCAAAAT
GATCAAATAA CAGATATAAA TGTTGATGAT TTAAAATACA CTAACTTAGA ACAAAACAGT
TTAACTACAA ATATTAATGA AATTTCATAT ATTTCTATTA AACAATTAAT TAAATCAATT
GCTTATGATC AACCTGCTTT ATCAAATAGC TTAATTGAAC AAGATAATAA AAAAATAGAA
ACTAAAAATA TTAAATTTAA TAAACCTGTA AGTGAACATA TTAGTATTTC AAAAGATATT
AAAAATAAAG CAATTAATAA TGCTAATCAA GTTCAAGGAA CTGATCTTAG TTCTTATTTA
GATGATATTT CTTCACTTTT ATCTAAATTT AATTCACCTA AAAAAGATAA AAAAACTAAG
CAATTAAATT TTGAAGATTA TTTTAATGAT GAAAATAATC AAAATAAAGA CGATAAATAA
|
|---|
| Protein sequence | MSDKSEIILY PLEELLGNRF SRYAKYIIQE RALPDVRDGL KPVQRRILYA MNQLNLTFDK
PYKKSARVVG EVIGKYHPHG DSSIYDAMVR MSQWWKVNIP LVDMQGNNGS IDGDSAAAMR
YTEARLTKIS NLLLEDLEKD TVIFSPNFDD SETEPTVLPS YFPNILVNGA TGIAAGYATN
MPPHNLSEII DATIDIIKNP NITIDQILKI VKGPDFPTGA IIQNKQGIRE AFLTGKGKVI
ISSKWHQEKN NIVIDEIPYE VVKQDLVKKI GDVIDNNPNL GIKEIRDETD RKGLRIVIEL
NEKANLETVR KFLFKSTWLS VSYNYNNIII VDKQPKQLGL IDIIKAYISH YKEVFIKRTE
FNLNKTNLRL EIVKGLIKAL SILDEVIKVI RKSENRIDAI NNLVISFNFT TNQSTAIVDM
RLYRLTSTDV NKLLLEKTEL IDKIKKYQEI LNDNLVLDNE IISRLEEVKK QFGIKRKSQV
EDLVEDLDVD QKEVIIEKEI NLWISKDGYI KVIDNNILNK NELSSFGKKP NDMWISQGVC
SNLDHLILIS DQANYYSIPL YKISTSKWKE QGVHINSVAT TQPNETIINA LVIKEFINST
QHLLLVTKNG LIKRTQISDL ETKIFNKSFK IMKISDDDSL VYADLISSKT SYCCIVTKNG
YAVRYNIEDI PIQSTISKGV KAANLKDDQI ISALSLQTNK DIIIFTNKNN YKKIDQNLIP
IYIRPKKGIR ILVEKKKNKE EVIFSFAINK EMILSILDQN DQITDINVDD LKYTNLEQNS
LTTNINEISY ISIKQLIKSI AYDQPALSNS LIEQDNKKIE TKNIKFNKPV SEHISISKDI
KNKAINNANQ VQGTDLSSYL DDISSLLSKF NSPKKDKKTK QLNFEDYFND ENNQNKDDK
|
|---|
| |