Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCAP_0206 |
Symbol | def |
ID | 3829109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
Kingdom | Bacteria |
Replicon accession | NC_007633 |
Strand | - |
Start bp | 249761 |
End bp | 250363 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 4 |
GC content | 24% |
IMG OID | 637823365 |
Product | polypeptide deformylase |
Protein accession | YP_424193 |
Protein GI | 83319871 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA GTTATTTGTT ACAAGATCAA ATTCCTTCAA ATAGTTGATT AGTTAAAGAT CATAAAAAAG AAATTATAAG AACAAAATCT ACTAAAATTA TTGACCCTAC AAATTTAAGT AATGATGAAG AATTAGTATT AAAAAAGCTA ATTGATTTTG TTACTTTTAG TCAAGATGAA AATAATAACA ATATAAATAA TAAAGACTAT TTGCGTCCAG CTGTTGGACT AGCAGCTCCA CAAATTGGTG TTAATAAAGA TATGTTTTAT GTAAGATTTC AACTTGATAA TAATAAAATA GAACAATATG CAATGATTAA TACAAAACTA ATTTCAACTT CAACTCAAAT TGCTTGTTTA AAAAATGGTG AGGGTTGTTT AAGTGTTGAT AATGATCATC TAGGTTTTGT ACCAAGACAT TATAAAATTG TTGTTCAAGG TTATGATTGA CTAACTAAAC AATATCTAAC TTTAACTTTA AGAAACTATC AAGCAATAGT TTTTCAACAT GAAATGGATC ATAACATTGG TATTCTTTAT TATGATCATA TTAATAAAAC TGACCCTTTA TATAAAGACA ATAGTTGAAT TATTATTGAA TAA
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Protein sequence | MDKSYLLQDQ IPSNSWLVKD HKKEIIRTKS TKIIDPTNLS NDEELVLKKL IDFVTFSQDE NNNNINNKDY LRPAVGLAAP QIGVNKDMFY VRFQLDNNKI EQYAMINTKL ISTSTQIACL KNGEGCLSVD NDHLGFVPRH YKIVVQGYDW LTKQYLTLTL RNYQAIVFQH EMDHNIGILY YDHINKTDPL YKDNSWIIIE
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