Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA3091 |
Symbol | |
ID | 3104015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 3276960 |
End bp | 3278324 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637172217 |
Product | decarboxylase family protein |
Protein accession | YP_115478 |
Protein GI | 53802757 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00268916 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGCCA TGAATGTCCA GGTCAGCCCG GAAGGCAGTC TCGAAGTCCT TTCCAAACTC GAAGTTGGGA AGTTGCTCGA CAGCAGCGAG AGCGCTCTTC ACGAACTGTT CCGCAATTGT TCGCTCGCGG TGTTGAACTG CGGCGGCCAG GTCGATGACA GCAGGGCGGT GTTCGATAAG TACCGCAACT TCGACATCCG AGTTCTCCCC ACGGCGCGCG GCGTGCGCCT GGAACTCATC GACCCCCCGC CGAGCGCTTT CGTGGACGGT GAAATGATCC GTGGGATACG CGAGCACCTG TTCTCGGTGT TGCGGGACAT CGTCTATACC CGCTTCGAGA TCGTCGGTGA TCCCAAATTC GACCTGTCCC AATCGCGGCA CATCACCGAT GCAGTGTTCC ACATCCTCCG CAACGCCAAT TGCCTAATCC CCGATGTGCC GCCGAACATG GTGGTGTGCT GGGGTGGTCA TTCCATCGAC CGCGGCGAGT ACGAGTACAC CAAGGAAGTC GGCCACGAAC TGGGTCTGCG GGGACTGGAC GTGTGCACCG GTTGCGGACC GGGAGCGATG AAAGGCCCCA TGAAGGGTGC CACCATCGCC CATGCCAAGC AGCGTATCCG GAGCCCGCGC TATGTCGGTA TCAGTGAGCC CGGCATCATT GCCGCCGAGC CGCCCAATCC GATCGTCAAC GAACTGGTCA TCATGCCTGA CATCGAAAAG CGCCTGGAGG CCTTCGTGCG GACGGGCCAT GGCATCGTCG TGTTTCCTGG CGGTGTGGGT ACGGCGGAGG AGGTTTTGCA CCTGCTCGGT ATCCTGCTGC ATCCGGAAAA CAAATACCTG CCGTTTCCCC TGGTCTTCAC CGGCCCCCGC CACAGCGCTG GCTATTTCGA GCAGATCGAC CGCTTCATCG GCGCGACTCT GGGGCAGGAA GCACGGAAGC GCTACCAGAT CGTGATCGGC GACCCTGCGC AGGTCGCCCG ACGGATGAAA GAAGGCATCG ATCTGGTGCG GCAGTTCCGG CGCCACCATG ACGACGCCTA TTACTATAAC TGGCTGCTTC ACCTCGAACC GGCGTTTCAG ACGCCTTTCG TGCCGAGCCA CGAAAACATG GCCGGCCTCG CCCTGCACCG GAACCAGCCT CCTCATGCGC TGGCGGCGAA TCTGCGGCGG GCTTTCTCCG GGATCGTCGC GGGGAACGTC AAGGCCGACG GCATCCGCCG GATCGAGCAG GAAGGGCCGT TCGAGATCCG CGGCGACCGT TCGATCCTCG ATCCCCTGGA CGAATTGCTC GCGACGTTCG TGGCGCAGAA GAGAATGAAG CTGCCGGGGA CGAAATACGA GCCGTGTTAC CGACTGGTCG CCTGA
|
Protein sequence | MSAMNVQVSP EGSLEVLSKL EVGKLLDSSE SALHELFRNC SLAVLNCGGQ VDDSRAVFDK YRNFDIRVLP TARGVRLELI DPPPSAFVDG EMIRGIREHL FSVLRDIVYT RFEIVGDPKF DLSQSRHITD AVFHILRNAN CLIPDVPPNM VVCWGGHSID RGEYEYTKEV GHELGLRGLD VCTGCGPGAM KGPMKGATIA HAKQRIRSPR YVGISEPGII AAEPPNPIVN ELVIMPDIEK RLEAFVRTGH GIVVFPGGVG TAEEVLHLLG ILLHPENKYL PFPLVFTGPR HSAGYFEQID RFIGATLGQE ARKRYQIVIG DPAQVARRMK EGIDLVRQFR RHHDDAYYYN WLLHLEPAFQ TPFVPSHENM AGLALHRNQP PHALAANLRR AFSGIVAGNV KADGIRRIEQ EGPFEIRGDR SILDPLDELL ATFVAQKRMK LPGTKYEPCY RLVA
|
| |