| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2932 |
|---|
| Symbol | |
|---|
| ID | 3103510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 3119840 |
|---|
| End bp | 3121330 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637172060 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_115324 |
|---|
| Protein GI | 53802922 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4383] Mu-like prophage protein gp29 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.163033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGTC GTGCACCGAC AGGGCTATAT CTGCCCTCCG GCGAGTTCGT CGCCTTCGCC
CAAGGTCCCG CGCTCGGCCA ACAACTGGTC ACCCGCCAAA CGGCGCTTGG CCAGTTCAGC
GGCCTGACTT GGCTGCCCAA CCCCGACCCG ATCCTCAAGA AGATGGGGAA ATCCATCGAG
GTCTATCGTG ATCTGCTCTC GGACGCGCAC GTCGCCGGCT GCGTTCGCCG CCGAAAAGCG
GCGGTACGGG CCATGGAACG GGGTGTCGAA CGCCGGTCAG CTGGCGCGCG CACCGCCAAG
AACATCGAGG CAATCCTGGC CGATCTGCCG CTGGCCCGAA TCATCGGCGA GATCCTCGAC
GCCGTGCTGT ACGGCTACCA GCCGCTGGAA ATCGTCTGGG AGCGCGTGGG GAATTTCGTG
GTGCCGGCGG ATGTGATCGG CCGGCCGCCC GAATGGTTCG TCTACTCCCG GAATAACGAG
CTAATGTTCC GCAGTCAGGC CTGCCCGATG GGCGAGCCGC TGCCGCCCAA TTCATTCCTG
TGCGCCCGCC AGGAGCCGAC CTATTTCAAC CCGTACGGCG CGCCGGATCT GGCGCTGGTG
TTCTGGCCGA CCACCTTCAA GCGCGGTGGG CTGGGATTCT GGATGCAGTT CGCCGAGAAG
TACGGCATGC CCTGGCCGGT CGGCAAGTAT CCCCGTGGGA CCGAAACGGG CGAGATCGAT
CAGCTGCTCG ACAGCTTGGA ACAAATGGTC CGCGATGGCG TAGCCGCGGT ACCGGCCGAT
TCCAGCATCG AGTTCCTGAC CCATGATCAA AGCCAAGGGG CCGACGCCTA CGAAAAGCTG
CTGCTGTTCT GCCGCTCCGA GGTCGCCATC GCCCTGCTCG GCCAGAACCA GACCACCGAA
GTCAGCGCCA ACAAAGCGTC GGCGGAGGCC GGAATCATGG TCACGCGCGA CATCCGGGAG
AGCGACGCGG AGATCGTCGC CAGTACCCTG AGCGACTTGA TCCGGATGGT CTGCGAACTC
AATTTCCACG AACCGGCTCC GCCCGTCTAT CAGCTGTGGG AACAGGAAGA GATCGACGAA
ACACGGGCCG TACGGGATAA GGCATTGCAC GATGCCGGGG TGCGCCCGAC CAATGTCTAC
TGGATGCGGG CCTATGGTTT CCAGGAGGGC GAACTGGCGC CCGAGGAAGG CAGCGGCGCT
CCGGCCTTCG CAGGAATCGA CCTTGAACTG TTCCCCGATC AGGCCGCGCT CGATGCGGCA
GTAGACGCGC TGGCCGAAGG TGGCGCCCTG CAGGCTCAGG CTGAACGGCT GCTCGCGCCG
CTCATCGAGC GGATCGAAAG TGCGGGTGGC GAAGCCGAAC TGCTCGGCGC ACTGGCGGAA
GCCTATCAGG ACATGAATCC CGACCAGCTG GTGCAAACCC TGACCCGGCT GATCTTCGCC
GCGAGCGTCG CCGGGCGGCT GGCGGCCGAG GAGAGCCTGC AAAATGGGTA A
|
|---|
| Protein sequence | MTRRAPTGLY LPSGEFVAFA QGPALGQQLV TRQTALGQFS GLTWLPNPDP ILKKMGKSIE
VYRDLLSDAH VAGCVRRRKA AVRAMERGVE RRSAGARTAK NIEAILADLP LARIIGEILD
AVLYGYQPLE IVWERVGNFV VPADVIGRPP EWFVYSRNNE LMFRSQACPM GEPLPPNSFL
CARQEPTYFN PYGAPDLALV FWPTTFKRGG LGFWMQFAEK YGMPWPVGKY PRGTETGEID
QLLDSLEQMV RDGVAAVPAD SSIEFLTHDQ SQGADAYEKL LLFCRSEVAI ALLGQNQTTE
VSANKASAEA GIMVTRDIRE SDAEIVASTL SDLIRMVCEL NFHEPAPPVY QLWEQEEIDE
TRAVRDKALH DAGVRPTNVY WMRAYGFQEG ELAPEEGSGA PAFAGIDLEL FPDQAALDAA
VDALAEGGAL QAQAERLLAP LIERIESAGG EAELLGALAE AYQDMNPDQL VQTLTRLIFA
ASVAGRLAAE ESLQNG
|
|---|
| |