Gene MCA2357 details

Gene Information

• Locus tag: MCA2357
• Symbol: rplF
• ID: 3102954
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 2545926
• End bp: 2546459
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637171500
• Product: 50S ribosomal protein L6
• Protein accession: YP_114773
• Protein GI: 53803432
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.700236
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTG TAGCGAATAA TCCAATCTCC ATTCCGAAGG GTGTGGAAGT AACCATCGCC 
GACGGTATCG TGACCGCGAA AGGCAAGAAC GGGCTGTTGT CACGCACCGT TCCCGCGGAA 
CTCGGAGTCG ATCTGGAGGG GGGCACTCTA TCCATCCGTT ACAACAAAAA CGATCAGCGG 
CAAAATGCCC TCGCCGGGAC GACACGGGCG AACCTGGCCA ACATGATCGT GGGTGTCAGC 
AATGGCTTCG AGCGGAAGCT CTCTCTGGTC GGCGTGGGGT ATCGTGCGCA GGCCAAGGGA 
GACGTATTGA GCCTCAGTCT GGGATTCTCG CATCCGGTGG AATTCAAGGT GCCTGCGGGC 
GTTGTGGTCG AGACGCCTTC GCAGACCGAC ATCGTGGTCA AGGGCGCCGA CCGGCAGGTG 
GTCGGTCAGG TGGCCGCCGA CATTCGTGCG TTCCGGGCTC CGGAACCCTA TAAGGGCAAG 
GGCGTCCGCT ATGCGGACGA GGTCATCATC CGCAAGGAAG CGAAGAAGAA GTAA 

 

Protein sequence

MSRVANNPIS IPKGVEVTIA DGIVTAKGKN GLLSRTVPAE LGVDLEGGTL SIRYNKNDQR 
QNALAGTTRA NLANMIVGVS NGFERKLSLV GVGYRAQAKG DVLSLSLGFS HPVEFKVPAG 
VVVETPSQTD IVVKGADRQV VGQVAADIRA FRAPEPYKGK GVRYADEVII RKEAKKK