| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2201 |
|---|
| Symbol | uvrB |
|---|
| ID | 3103248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 2376669 |
|---|
| End bp | 2378663 |
|---|
| Gene Length | 1995 bp |
|---|
| Protein Length | 664 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637171347 |
|---|
| Product | excinuclease ABC subunit B |
|---|
| Protein accession | YP_114621 |
|---|
| Protein GI | 53803510 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
|---|
| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTGCGAA GCGGTTATGC GCCGTCGGGC GATCAGCCGG AGGCCATCCG GCGTCTGGTC
GAGGGCCTGA ACGACGGCGA GTTGCACCAG ACGCTGCTCG GCGTGACCGG TTCGGGCAAG
ACTTTCACCA TTGCCAACGT GATTGCCCAG GTTCAGCGCC CGACCCTGAT CCTGGCGCAC
AACAAGACGC TGGCCGCGCA GCTTTACGGC GAGATGAAGG AATTCTTCCC CGAGAATTCG
GTGGAATACT TCGTGTCCTA TTACGACTAC TACCAGCCCG AGGCCTATGT GCCGGCCTCC
GACACCTACA TCGAAAAGGA TTCGTCGCTG AACGAGCACA TCGAGCAGAT GCGGCTGTCG
GCGACCAAGG CGCTGATCGA GCGGCATGAC ACCGTCATCG TCGCGACCGT GTCCTCCATC
TACGGCCTGG GCGAGCCGGC CTCCTATTTC GAGATGGTGC TGCACCTGGT GCGCGGTGAC
ATGATCGACC AGCGCACCCT GGTCCGGCGT TTGGCCGAGC TCCAGTACAC CCGTAATGAA
GCCGAACTGC GGCGCGGCAG CTATCGTGTC CGGGGTGACG TGATCGACAT CTACCCGGCC
GAGTCGGAGA AGGAAGCGCT GAGGGTCGAG CTGTTCGACG ACGAGATCGA GCGGCTGTCG
CTGTTCGACC CCTTGACCGG CGAGGTCATT TCCCGCATCG CCCGCTACAC CGTCTACCCC
AAGACCCATT ACGTCACTCC TCGGGAGAAG CTGCTGGAGG CGGTGGAAGA GATCAAGGTC
GAACTCAAGG ACCGGCTGGA GCATCTCCGC AGCCAGCACA AACTGGTGGA AGCCCAGCGC
CTCGAACAGC GGACCCTGTT CGACGTCGAA ATCATCCTGG AGGTCGGCTA TTGCTCGGGC
ATCGAGAACT ATTCACGCTT CCTGTCGGGC CGGGCGCCGG GCGAACCGCC GCCGACCCTG
TTCGATTACT TGCCGGACGA TGCGCTGATC GTGATCGACG AGAGCCATGT CACCGTGCCG
CAGATCGGCG CTATGTACCG CGGCGACCGC TCCCGCAAGG AAACGCTGGT GGAGTATGGC
TTCAGGCTGC CGTCGGCGCT CGACAACCGG CCGCTCAAAT TCGAGGAATT CGAGGCGCGG
GCGCCGCAGC GGATCTATGT CTCGGCGACG CCGGGCCCCT ATGAACGGGC CCACTCCGGG
GCGGTGGTGG AACAGGTCGT GCGCCCCACC GGCCTGGTCG ATCCGGAAGT CGAGGTCCGC
CCTGCATCGA CCCAGGTCGA CGATTTGCTG TCGGAGATCC GCTTCCGGGT GCAGGGGGGC
GAACGCGTGC TGGTGACCAC GCTGACCAAG CGCATGGCCG AGGACCTCAC CGAGTACCTG
ATGGAACACG ACGTGGCCGT GCGCTATCTG CACTCCGACG TGGACACCGT GGAACGGGTG
GAAATCATCC GCGACCTCCG GCTCGGCAAG TTCGACGTCC TGGTGGGCAT CAACCTGCTG
CGCGAAGGTC TCGACATCCC GGAAGTGTCA CTGGTGGCCA TCCTCGACGC CGACAAGGAA
GGGTTCCTGC GCTCGGCGGT GTCGCTGATC CAAACCATCG GCCGGGCTGC CCGCAACCTG
CACGGCAAGG CCATCCTCTA TGCCGACAAG GTGACGCAGT CGATGCAACA GGCCATCGAC
GAGACCGAGC GTCGCCGGGC CAAACAGATC GCCTATAACG AAAGGCATGG CCTGACCCCA
AGGGGTATAA CCAAGTCCGT GACCGACATC CTGGAAGTGT CCATTCCGGG AGGCTCCGCG
GGCTCGCGAA AGCAGGCGGC CCGCGTCGCC GAACCTGGCG CCGGGTACAA GGTGGCCAAA
CCGTCGGAGG CGGCCAGGCT CATCAAGCAG CTCGAAGAAA AGATGTACGC GCATGCCCGC
GATCTGGAGT TCGAGGAGGC GGCCAGGCTG CGCGACGAGA TCCAGCGGAT CCGGGAGAGC
GCACTGATGG CGTGA
|
|---|
| Protein sequence | MLRSGYAPSG DQPEAIRRLV EGLNDGELHQ TLLGVTGSGK TFTIANVIAQ VQRPTLILAH
NKTLAAQLYG EMKEFFPENS VEYFVSYYDY YQPEAYVPAS DTYIEKDSSL NEHIEQMRLS
ATKALIERHD TVIVATVSSI YGLGEPASYF EMVLHLVRGD MIDQRTLVRR LAELQYTRNE
AELRRGSYRV RGDVIDIYPA ESEKEALRVE LFDDEIERLS LFDPLTGEVI SRIARYTVYP
KTHYVTPREK LLEAVEEIKV ELKDRLEHLR SQHKLVEAQR LEQRTLFDVE IILEVGYCSG
IENYSRFLSG RAPGEPPPTL FDYLPDDALI VIDESHVTVP QIGAMYRGDR SRKETLVEYG
FRLPSALDNR PLKFEEFEAR APQRIYVSAT PGPYERAHSG AVVEQVVRPT GLVDPEVEVR
PASTQVDDLL SEIRFRVQGG ERVLVTTLTK RMAEDLTEYL MEHDVAVRYL HSDVDTVERV
EIIRDLRLGK FDVLVGINLL REGLDIPEVS LVAILDADKE GFLRSAVSLI QTIGRAARNL
HGKAILYADK VTQSMQQAID ETERRRAKQI AYNERHGLTP RGITKSVTDI LEVSIPGGSA
GSRKQAARVA EPGAGYKVAK PSEAARLIKQ LEEKMYAHAR DLEFEEAARL RDEIQRIRES
ALMA
|
|---|
| |