Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2010 |
Symbol | |
ID | 3103147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 2156922 |
End bp | 2158727 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637171165 |
Product | calx-beta domain-containg protein |
Protein accession | YP_114442 |
Protein GI | 53803708 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGATTTC ATCTTCTTCT TTCCCGATTC CCCTTGAATT GGCTGGGTGT TTTGATTCCG CTGTGCCTTA ATCCGGCGAA TGCTGCGCCG CCGGACCCTT TCGAGGGGGC TCGGCATGTA TTGACCGTAA AGTTCAACGT CAACAGGCCC GTTACGGACA CGGATGACCA ATTCCGGGCC GTCCTCCAGC TCATGGACGC CATCGATGGT GAAACGGCTG GCGTGGCCGA ACATCATCCG GCCAAGGACG CCACCTGCGA TCAGTGTCAC GTCAAGGATT TCATCTCCGT GGACCATTAC GGCCTGATGA TCAATGAAGC GAACCCGGCC AAGAGCTGCG AAAAGGCCGG CTGCCATAGC CTGACGGTGG CGGGGGAGAT GCCGTTCTAC GTCAAACCGT TTGCGTCGCT GGATGAAACC AGGAACGCTG GACTGGCGAA GCAGCGTTTG GCCGCGGCCC GGACCCTGTT GCGATATGCC GGGTCGTTCA AGGGAAACAT GGCTGCACGC CTCAGCGGGC TGCCTCAGAT CGGATCGTTT TCGATCGACG TCCGTGCCCA GGACAAGAAC ATCAACAATC TGACGCACGA CGTGCCGCTG GTGTTCTTCG AGCCGAAAAA CGCCTTCGAC GTGAAGAAAA ACGCCGATCT GCTGCCCCAG TATGCCGCCG CCCTGTCGAA CGAGGTGCTG TCCCTGGTTG AGCAGGACAT GAGCGTCCCG ACCCGGCTGG AGGCGACGGT GGAAGCCAGG ATGGCCAGGG CGGCCGATTT GCACAAGCAT CTGGCGCTCG CGGATCAGGA TATGTCCATA CAGCCTCTGC TGACGAATTC GCAGATCGCG CTGCGTTATC TGGCGACCCT GCCGGCCGAA GCCGCCGATT TCATGTCGTC CCGGCTGGCG GAAGACTTTC CTGCCGCTGT GCTCAAGACC GACGCCACGA CCGGCGAGGC CGCGACCGGC CTGCGCCGCA CCGTCACCTG GGAAATTCCC GCGGTGGCCA ATGACGGGGT GAACGCCGCT ACGATCGTCT TGCAGCGCAA CGAAGAAGGC AGCCGGACCC AGCCCTCGAC GCAACTGCAG TTCCAGCGGC TGGCCGGTTC CATGCGCGAT ACCGCCGTCC GGATGCTCGA ATCCTTCCAG GAACGTTATT CCGCGTTCGC CGCCGATCAT GCCCGCTTCA CGTTGACCTA TCAGGCCAGC CGGGAGGCGG ACAAGAGTCT GTTGACCACG GCGATAGGGA ATTCCAGGGA AGCTGCGGGT GCGGGCGAGC TCAGGCGGAC ACTGACGCAC AACGAAAACA CGGCCACTGG CACTCTGCCG GCGCCGGGCC AAGTGAGTGC GGCCATCGGC GCGGCCAAAG AGATCGCTGC GGCGAATCCT GCCGCGATCC GCAGGCTCCG CAGCACCCTG CGCTTCAAAC CCGATCTGAC GACCGTGTCC CAGATCGCCG GCGAGGTGCT GCTGGGCTCG CTTCCGCGCG TCTGGGTGTC GGCTGCCCGG ACCGAAATTG CCGAAGGAAG CGGAGAGCGG CTGGTTTTCA CCGTGTCTCG CGAGACGCCG ATGGACAGGT CCTTGACCGT TAATCTGACG CTGGGCGGCA CTGCCCGGCC GGGCAAGGAC TATATCAAGC CCAAGCTCCG GGTCACTCTG CCAAAAGGCG TCGCCAGCGT GGATGTGTCG GTGAAGCTCC GCGACGACCG CCTGATCGAA GGGCGGGAAA CGGTCACCGT GGCCATCGCC GGAAGGCGGG AGTACACCCG CTTGCCGGCG GCGGAGGCCA CGGTCGCCAT CGCCGACGAC GATTGA
|
Protein sequence | MRFHLLLSRF PLNWLGVLIP LCLNPANAAP PDPFEGARHV LTVKFNVNRP VTDTDDQFRA VLQLMDAIDG ETAGVAEHHP AKDATCDQCH VKDFISVDHY GLMINEANPA KSCEKAGCHS LTVAGEMPFY VKPFASLDET RNAGLAKQRL AAARTLLRYA GSFKGNMAAR LSGLPQIGSF SIDVRAQDKN INNLTHDVPL VFFEPKNAFD VKKNADLLPQ YAAALSNEVL SLVEQDMSVP TRLEATVEAR MARAADLHKH LALADQDMSI QPLLTNSQIA LRYLATLPAE AADFMSSRLA EDFPAAVLKT DATTGEAATG LRRTVTWEIP AVANDGVNAA TIVLQRNEEG SRTQPSTQLQ FQRLAGSMRD TAVRMLESFQ ERYSAFAADH ARFTLTYQAS READKSLLTT AIGNSREAAG AGELRRTLTH NENTATGTLP APGQVSAAIG AAKEIAAANP AAIRRLRSTL RFKPDLTTVS QIAGEVLLGS LPRVWVSAAR TEIAEGSGER LVFTVSRETP MDRSLTVNLT LGGTARPGKD YIKPKLRVTL PKGVASVDVS VKLRDDRLIE GRETVTVAIA GRREYTRLPA AEATVAIADD D
|
| |