Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1604 |
Symbol | hypF |
ID | 3104635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1710851 |
End bp | 1713115 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637170772 |
Product | [NiFe] hydrogenase maturation protein HypF |
Protein accession | YP_114054 |
Protein GI | 53804353 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGACCG CCCAGCGCAT CCAGGTCCGC GGCCGTGTGC AAGGCGTGGG GTTCCGCCCC TTCGTCTGCC GGCTCGCCCG CGAATTCGGC CTCGCCGGCT GGGTGAGGAA CCGCGGCGGC GGCGTCGAAA TCCACGCCGA AGGCGATCCA GCCGCGATCG AGCGGCTCAT CGACGCACTG GTCTCCCGTG CCCCGCCGCT GGCCGATCCG CAGCCGCCCG TTCACCGGCC CGCCGAATTC CGGGGCTACG CCGGGTTCGA AATCCTGCTC AGCGATTCCG GGGACAAAAC GCCCATCCAC GTGCCGCCGG ACCACTTCGT CTGCCCCGAT TGCCTGGACG AAATGCGAGA CCCCGCCGCC CGCCGCTACC GCTACCCCTT CATCAACTGC ACCCAATGCG GGCCGCGCTA CACCCTCATC GACCGGCTGC CCTACGACCG CCCGAACACC GCGATGGCGG ACTTCCCGCT GTGCCAGGAC TGCCGGCGCG AGTACGAAGA CATTCACGAC CGGCGCTACC ACGCCCAGCC GCTGGCCTGT CCTCTGTGCG GGCCGGTGCT GGAATTTCGC GAGCTGTCCG CATGCATCGC CATACCGGGT AACGAACCGG CGCTCTCGGG CTGCATCGAA GCCCTACGGC AAGGCCAGGT CGTCGCCGTC AAAGGCGTCG GCGGCTACCA CCTCCTCTGC GACGCCCGCT CGGATGCCGC CGTCGGGCGC CTGCGCGAAC GCAAACGCCG CCCGGACAAA CCCCTCGCGG TGCTGATCCC CTGGTTCGAA GGCGAAGGGG TCGATTGGCT GGCACGCCTG GCCGAGCCGC GCCCTGACGA ACGCGAACTG CTGGCATCCC CGCTCCGACC CATCGTCATC GTGCAACGCT CCGTCGACAG CGATCTGTCC GGCCTCATCG CGCCGGGCCT GGACGAGATC GGCCTGATGT ACCCCTACAG CCCGCTGCAT CACCTGCTGG CGGGCGACTA TGGCGCGCCG CTGGTCGCCA CTTCGGCCAA CCTCAGCGGC GAGCCGGTGC TGACCGACGG CGCGGAAGTC GAGCGCCAGC TGGCTCACGT CGCCGATGCC TTCCTGCATC ATGACCGGCC GATCCGCCGG CCCGCCGACG ACTCGGTTTA CCGCCGCAGC GCCGGGAGTA TGCGGCCCTT GCGGCTGGGT CGCGGTACGG CGCCGCTCGA AATGCCTCTC CGCTACCCGG TGGCCGAACC CACTCTTGCG CTCGGGGCCG ATCTCAAGAA CACCATTGCC CTGGCCTTCG AAGACCGCGC GGTCGTCTCC CCGCACCTCG GCAATCTCGG CGCGCCGCGC AGCCTCGACG TATTCGGGCA ACTGATTCGG GAGCTGTCCG CCTTGTACGG GATCGCGCCG AAGCGGGTGG TCTGCGACGC TCACCCCGAC TACTTCTCCA GTCGCTGGGC CCGGGCCTGC GGGCTCGAAA TTCACCGCGT CCTCCACCAC CATGCACACG CCTCGGCGCT TTACGGCGAG TTCGGGCCGG ACGGCGACAT CCTGGTGTTC GCCTGGGACG GCACCGGCTT CGGCGGCGAC GGCACCCTGT GGGGCGGCGA AACCCTGCTC GGCCGGCCTG GCGGCTGGCG CCGGGTCGGA AGCCTGCGGC CGTTCCGGCT CATCGGAGGC GAAAAGGCCA GCGCCGAGCC CTGGCGCTGC GCGCTCGCGG CCTGCTGGGA AGCGGGGCTG GACTGGTCCG GCTGCCCGGT GGACCCCGCG CCGTATCGGC ACGTCTGGGA ACGCGGGATC AACAGTCCCT ACACGAGCTC CGCCGGACGT CTGTTCGACG CCGCCGCCGC CCTGATCGGC GTCACGCTGA ATCAAAGCCA CGAAGGCCAG GCCGGTATGC GGCTGGAAGC GCTGGCCGGC GACACGGCGG ATTTCATCGA ACTGCCGGCG CGGCGTGAGA ACGGCCTGTA CCGCATCGAC TGGAGCCCTC TGCTGCCCGC TTTGATGGAC GGGAGCCAAC CGGCCGGCTA CCGCAGCGCC CTGCTCCATG CCAGCCTGGC CCACGCGGTT CTGGCCCAGG CCCGAGCGAT CCGCGGCGAA TCGGGCGTAA ACCTAGCCGG CCTCACCGGC GGCGTGTTCC AGAACCGTAT TCTCGCCGAA CTGACCGCGA ATCTGCTGCG GGCCGACGGA TTCGAAGTCG TCCTGCCCGC CAGCCTTCCT GTCAACGATG CCGCGATCGC CTACGGCCAG CTCGTCGAGA CCGCCGGCGC CGGCCGGGCG CCCAGCCCCG CTTGA
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Protein sequence | MRTAQRIQVR GRVQGVGFRP FVCRLAREFG LAGWVRNRGG GVEIHAEGDP AAIERLIDAL VSRAPPLADP QPPVHRPAEF RGYAGFEILL SDSGDKTPIH VPPDHFVCPD CLDEMRDPAA RRYRYPFINC TQCGPRYTLI DRLPYDRPNT AMADFPLCQD CRREYEDIHD RRYHAQPLAC PLCGPVLEFR ELSACIAIPG NEPALSGCIE ALRQGQVVAV KGVGGYHLLC DARSDAAVGR LRERKRRPDK PLAVLIPWFE GEGVDWLARL AEPRPDEREL LASPLRPIVI VQRSVDSDLS GLIAPGLDEI GLMYPYSPLH HLLAGDYGAP LVATSANLSG EPVLTDGAEV ERQLAHVADA FLHHDRPIRR PADDSVYRRS AGSMRPLRLG RGTAPLEMPL RYPVAEPTLA LGADLKNTIA LAFEDRAVVS PHLGNLGAPR SLDVFGQLIR ELSALYGIAP KRVVCDAHPD YFSSRWARAC GLEIHRVLHH HAHASALYGE FGPDGDILVF AWDGTGFGGD GTLWGGETLL GRPGGWRRVG SLRPFRLIGG EKASAEPWRC ALAACWEAGL DWSGCPVDPA PYRHVWERGI NSPYTSSAGR LFDAAAALIG VTLNQSHEGQ AGMRLEALAG DTADFIELPA RRENGLYRID WSPLLPALMD GSQPAGYRSA LLHASLAHAV LAQARAIRGE SGVNLAGLTG GVFQNRILAE LTANLLRADG FEVVLPASLP VNDAAIAYGQ LVETAGAGRA PSPA
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