| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1512 |
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| Symbol | |
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| ID | 3103634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1612101 |
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| End bp | 1613753 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637170686 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_113968 |
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| Protein GI | 53804387 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0206479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCGTC GCAGTTCCGA TGATGCGGAA TCCGTCGCCT CCGGTGAGGC GGGGATCGAC
CGGCTTCATC AGCAGATCGA GCAAGCTTTG ACGGCGGGCG ATCTGGCCCT TGCCGAAAGA
TGCTGCCGGA AAGCTCTGGA ACTGCAGCCT GATGCGGCCC TGACCCGTCT CCATCTCGCC
AGGATCAGGC TCGCTCAAAG GCGTCTGGCG GAAGCCTCGG AATGTCTGGA GCGGGCCGAA
CACTCGCCCG GCCTCGACGC GAAAACCCTC AACCGCATCG GGATCGTCTG GCTGGACCTG
GACGACTGCG CACGAGCGGA GACATGTTTC CGTTCGGTCC TGGCCAGGGA CGACGCCCAT
GCCTACGCCT GGTGCAATCT GGGGATCGCC TTGCAGCGCA AAGGCGACCT CGGGGACGCT
TTGACATGTT TTCGGCGCGC TTTGGAACTG AAGCCGGATT TCGCCGAGGC CATGCATAAT
TGCGGGCTGC TGCTGAGAGA CCTGGGCAGG CCCGCGGAAG CGCTGGAGAT ACTCGAACGG
GCTTTGTCGC TGAAGCCGGG GTTTGCGTTG GCCCAGACCA ATATCGGTGT CGTGCTGCAG
GACTTCGGCA AGTTCGACGA TGCGATCGCA GCCTTCGATC AGGCACTGGA GATGGAGCCG
CAGTGCGGCG ACATCCATCT GACCAAAGCC CACCTGCTGC TTTCGGTCGG GCGTTTCCGT
GAAGGCTGGG AGGAACAGGA ATACAGGCGT CTGGCTCCGG AGTTTCCACG CGATCGTTTC
CCGTTCCCCG AATGGAAAGG GGAGGACCTT GCCGGAAAAA ACCTGCTGGT CTGCGCCGAA
CAGGGAATCG GCGATGAAAT CATGTTGGCC GGCTGCTTTC CGGATCTGTT TGCAAGAGGC
GGCCGCTGCG TGATCGAATG CGATCCCCGA CTCGAAACTC TGTATCGGCG TTCTTTTCCA
CAGGCCGAAT TTGCCGGTAA AAGGTTCAAA AATCCGGACA CCTGGCTGGA AGCATTCCAC
CCCATCGACC TGCAAATACC CCTAGGCAGC CTTCCCCGGT TTTTCCGCAA CGAAGTTTGC
GAGTTTCCCT TCCATTCCGG CTATCTGACG GCCGATCCAC GGCGTGTCGG ACGCTGGAAA
GAACGACTCG CCGCACTGGG GCCGGGGTTG AAAATCGGCT TGTCATGGCG AGGCGGGACC
AGCAGAACCA ATGCGTATTT ACGGTCGATA CCCCTGGAAA TCTGGTTGCC GATATTACGG
CTGAGGGAGG CGCATTTCGT AAGCCTTCAG TATACCGATT GCCGGTCCGA ACTGGATTCA
CTCCACTCAC GCCATGGCAT TCGGATTCAT TCCTGGCGCC AGATCGGAAG CGATTTCGAG
GAAACGGCCG CTTTGGTCGC CAGCCTGGAT CTGGTCGTCA GCGTCTGTAC GGCGGTCGTC
CATCTGGCCG GCGCCCTGGG AGTACCGGTG TGGGTTCTGG TACCGAGTTC GCCGGGCTGG
CGGTACGGGC GCGAGGGATC ACGCATGCCC TGGTACCCGG CAGCCCGCTT GTTCCGGCAG
GTGAAGCCAC TTTATTGGGA ACCGGTCATG GCCGAAGTAG GTAATGAACT CGCATGTATG
ACGACCGTAT CATCACCCCG TGAATTTATC TGA
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| Protein sequence | MVRRSSDDAE SVASGEAGID RLHQQIEQAL TAGDLALAER CCRKALELQP DAALTRLHLA
RIRLAQRRLA EASECLERAE HSPGLDAKTL NRIGIVWLDL DDCARAETCF RSVLARDDAH
AYAWCNLGIA LQRKGDLGDA LTCFRRALEL KPDFAEAMHN CGLLLRDLGR PAEALEILER
ALSLKPGFAL AQTNIGVVLQ DFGKFDDAIA AFDQALEMEP QCGDIHLTKA HLLLSVGRFR
EGWEEQEYRR LAPEFPRDRF PFPEWKGEDL AGKNLLVCAE QGIGDEIMLA GCFPDLFARG
GRCVIECDPR LETLYRRSFP QAEFAGKRFK NPDTWLEAFH PIDLQIPLGS LPRFFRNEVC
EFPFHSGYLT ADPRRVGRWK ERLAALGPGL KIGLSWRGGT SRTNAYLRSI PLEIWLPILR
LREAHFVSLQ YTDCRSELDS LHSRHGIRIH SWRQIGSDFE ETAALVASLD LVVSVCTAVV
HLAGALGVPV WVLVPSSPGW RYGREGSRMP WYPAARLFRQ VKPLYWEPVM AEVGNELACM
TTVSSPREFI
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