Gene MCA1371 details

Gene Information

• Locus tag: MCA1371
• Symbol: def
• ID: 3102451
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 1460092
• End bp: 1460667
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637170547
• Product: peptide deformylase
• Protein accession: YP_113830
• Protein GI: 53804337
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGGCC TTGCCCTCAG ATTGAAGATC GTCCAGGCCG GCGAACCGGT GCTGCGGCAG 
CGGGCGCGTC CCTTGAGCCC GGAAGAAATC CGCAGCGCCG CGGTCCAGGC ACTGATCGGG 
CACATGCGCG AGACGATGCG CGACGCGCCG GGCGTGGGAC TCGCCGCGCC GCAGATCGGC 
CAGGGTCTGC AACTGGCCGT CATCGAAGAC CGCGCCGACT ACCATAGGGG CCTGTCGGCC 
GAGGAACTGG CGGCGCGAGG ACGCGAACCG GTACCCTTCC ACGTCATCGT CAACCCGGAA 
ATCGTCGCCC GCTCGGAAGA GACCGACGTC TTCCACGAAG GCTGCCTCAG CCTCGCGGGC 
TTCAGCGCAC GGGTGGAGCG TGCCCGCTGG GTGCGGGTAT CCTGCCTGGA CCACCGGGGG 
GAACCGCAGA CCATCGAGGC CAGCGGCTGG TATGCCCGCA TCCTGCAGCA CGAGATCGAC 
CACCTGCACG GGAGGCTCTA CATCGACCGC ATGGACCCAC GCAGTTTCAC TACCCAGCCC 
AACCACGTCC GTTACGGCGA CATCGAAACC AGCTGA 

 

Protein sequence

MDGLALRLKI VQAGEPVLRQ RARPLSPEEI RSAAVQALIG HMRETMRDAP GVGLAAPQIG 
QGLQLAVIED RADYHRGLSA EELAARGREP VPFHVIVNPE IVARSEETDV FHEGCLSLAG 
FSARVERARW VRVSCLDHRG EPQTIEASGW YARILQHEID HLHGRLYIDR MDPRSFTTQP 
NHVRYGDIET S