| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1168 |
|---|
| Symbol | |
|---|
| ID | 3104174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 1224479 |
|---|
| End bp | 1225693 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637170351 |
|---|
| Product | colanic acid biosynthesis glycosyl transferase, putative |
|---|
| Protein accession | YP_113636 |
|---|
| Protein GI | 53804725 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0854852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTC TATTTCTTAA CCGCTTCTTC TACCCCGACC ACTCCGCGAC CAGCCAGTTG
TTGTCCGATC TGGCGTTCGC CCTCGGCGAA TCGGACCGCA AGGTGCGGGT GATCACCAGC
CGGCAGCGCT ATGATGACCC CGGCGCGGAC CTGCCGGCGT TCGAGGCGGT GGGCGGGGTC
TTCGTGCACC GGGTGTGGAC CTCGCGCTTC GGAAGGGCAT GGCTGCCCGG GCGGGCGCTG
GATTATCTGA GTTTCTATGT CTCGGCAGGA TGGCGCCTGT GGCGGCTGAC GCGGGAGGGC
GACGTGATCG TGGCAAAGAC CGACCCGCCT TTGATTTCGC TGGTGGGTGC GGTGGTTGCC
CGGCTGCGCG GGGCGAGGCT GGTGAACTGG CTGCAGGACC TGTTTCCGGA GGTGGCCGAG
GCGTTGGGCG TGCGGATGCC GGGCCTGGCC GTGCGCCGGT TGCGGGATTG GCGGAACGCA
TCGCTGCGGC AGGCCCGGAC GAACGTGGTC CTGGGCGAGC GAATGGCGGA GCGGCTGCGC
GAATCGGGCG TCCCGCCGGA GCGGGTCGAG ATCATCCACA ACTGGGCGGA CGGGGGGGCG
ATTCGGCCCA CGGCGGCGGA GGGCAACCCC CTGCGGGAGG AGTGGGGGCT GTCGGGCAGG
TTCGTCGCCG CCTATTCCGG CAACCTGGGC CGGGCCCATG AGTTCGACAC CCTGCTGGCG
GCGGCCGAAA TCCTGCGCGG CCTGGACGGT ATGGCGTTCC TTTTCATCGG CGGCGGACAC
GGTTACGAAA AGCTGCGCCT GGAAGCGAAG CGGCGGGGGC TTGCCAATGT CCTTTTCAGG
CCGTACCAGC CCCGCGAGCG TCTGGGGCTC AGCCTGACCC TGCCGGATAT CCACCTCATC
TCGCTATTGC CCGCGCTGGA AGGACTGATC GTGCCGTCCA AGTTCTACGG CGTGCTGGCG
GCCGGCCGGC CCGTCGCTTT TGTCGGGGCC AGAGACGGCG AGCTGTCCCG GCAGATAGAG
CGGCATGCCT GCGGCGCAAG CTTCGCGCCG GGAGACGCCG ATGGACTGGC GGGGTTTCTG
CTCGCCCTCA GCCGGGACGG CGAGAGGCGG GAGCGGATGG GAAGAAACGC CCGGACCGCC
TTTGAAAACG AATTCGACCA GGCCCGCGCG CTGGCGAAAT GGTGCGCCTT GCTCACTCCG
TTGCGGCCCT CCTGA
|
|---|
| Protein sequence | MQILFLNRFF YPDHSATSQL LSDLAFALGE SDRKVRVITS RQRYDDPGAD LPAFEAVGGV
FVHRVWTSRF GRAWLPGRAL DYLSFYVSAG WRLWRLTREG DVIVAKTDPP LISLVGAVVA
RLRGARLVNW LQDLFPEVAE ALGVRMPGLA VRRLRDWRNA SLRQARTNVV LGERMAERLR
ESGVPPERVE IIHNWADGGA IRPTAAEGNP LREEWGLSGR FVAAYSGNLG RAHEFDTLLA
AAEILRGLDG MAFLFIGGGH GYEKLRLEAK RRGLANVLFR PYQPRERLGL SLTLPDIHLI
SLLPALEGLI VPSKFYGVLA AGRPVAFVGA RDGELSRQIE RHACGASFAP GDADGLAGFL
LALSRDGERR ERMGRNARTA FENEFDQARA LAKWCALLTP LRPS
|
|---|
| |