| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0284 |
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| Symbol | |
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| ID | 3104886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 269243 |
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| End bp | 270799 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637169505 |
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| Product | outer membrane efflux family protein |
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| Protein accession | YP_112818 |
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| Protein GI | 53802442 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.552621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCA CCCTGTACGA TTCGGCTCGA GTCCTGCTGC TGCGCCTCGC GCTTGCGGCC
GGCTTGGGGC TCCTGCTCGA CGGCTGCAAC AAAATCGGCC CGGACTTCCA CCGGCCAGAA
ATCAAACTCA CCGATACCTG GCTGGATGCG CCGAAAAAAG CCGCCAAGGC CGGCGATTTC
CGCAACTGGT GGAAACTGTT CAACGATCCG GTGCTGGATC GTCTCATCGA GAAGGCTTAC
CGGCAGAATC TGGACGTCCA GAAAGCGGCG ATCCGCATCT ATCAGGCGCG CGCCCAGCTC
GGCATCGCCA AAGGCTACCT GTTCCCCCAG AAACAGAACG TGGGAATGGA CACATTCTAT
GAACGCATCA GCGAATACTC GCCCTACTAC CAGGGAAGCG ATTTCCACAC GTTCACCTAT
TTCCAGACCG GATTCGACGC CATGTGGGAG CTCGACATCT GGGGCCGGTT CCGCCGCGGC
ATCGATGCCG CGGGTGCGGA ACTGGCGGCA TCGACCCTGC AATATGACGA CATGGTGGTG
ACGCTGACCG CCGAAGTGGC TGCCGCCTAT GTCCAGATAC GCACGTTCAA TCAGCGCCTG
GCGCTCGCCA AGGGCAATGC CGACCTGCAA GAACGCAGCT TCCGCGTCGC CGAATCACAG
TTCCGCAACG GCCTGAGCAC CGAACTCGAC ATGCAGCAGG CCAAGGCGCT GCACCAGGCG
ACCCTGGCCG AGATCGCCAA CCTGGAAGTG GGACTGCGCC AGTCGAAGAA TGCCCTGAGC
GTCCTGCTGG GGATGCAGCC CAGCCACCTC GAAAAGGAAC TGGGCCCGGA CAGCGACATC
CCCGCCGCCC GGTCGGAGAT CGCCATGGGC ATCCCCACCG ACATCCTGCG CCGCCGCCCC
GACGTGCGCG CCCAGGAATA CAAGGCCGCC TCCCAATGCG CCCAGATCGG GATCGCCGAG
AGCGAACTCC TCCCCCGCCT TTCCCTGGTC GGCACCGTCG GCTTCAATTC CGGCAGCGTC
GACGGACTCG ACGTGGCCAA CGCCATCAGC CCTTCCGGGC TGGCGGGCAA ATTCGGACCG
ACCGTCATCT GGCCGATCTT CCAGTACGGA CGACTGACCA ACAACGTCCG GGTCCAGGAC
GCCAAGTTCC AGGAACTCCT GACCGACTAC CGCAGCACCG TATTGCGCGC CCTGCGCGAG
GTGGAAGACG CGATCATCGC CTTCAAAAAA GCCGAGGAAA GGGTGGCCAG CCTGTCGGAC
GGCGTCCGGG CCTCCCAGCG CGCCGCCGAA CTCGCCTTGC GGCAATACCA GAACGGACTC
GAGGACTACA CCCGGGTCCT CAATTCGGAA CTGTTCCTGG TGCAGCAGCA AGACCGGCTG
ACCGCCAGCC GCGGAGACGT CGCCCGCAGC GTCATCGCCA TGTACAAGGC GCTGGGTGGC
GGCTGGGAGA TTCGGGAAGG CCGGGAACTG CTGCCGCCCG GCGTGAAGAA GGAAATGCGC
GAGCGTACCG ACTGGAGCGA CCTGCTCGAG GAACCCGTCG GCAAGGGAAT CGACTAG
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| Protein sequence | MRITLYDSAR VLLLRLALAA GLGLLLDGCN KIGPDFHRPE IKLTDTWLDA PKKAAKAGDF
RNWWKLFNDP VLDRLIEKAY RQNLDVQKAA IRIYQARAQL GIAKGYLFPQ KQNVGMDTFY
ERISEYSPYY QGSDFHTFTY FQTGFDAMWE LDIWGRFRRG IDAAGAELAA STLQYDDMVV
TLTAEVAAAY VQIRTFNQRL ALAKGNADLQ ERSFRVAESQ FRNGLSTELD MQQAKALHQA
TLAEIANLEV GLRQSKNALS VLLGMQPSHL EKELGPDSDI PAARSEIAMG IPTDILRRRP
DVRAQEYKAA SQCAQIGIAE SELLPRLSLV GTVGFNSGSV DGLDVANAIS PSGLAGKFGP
TVIWPIFQYG RLTNNVRVQD AKFQELLTDY RSTVLRALRE VEDAIIAFKK AEERVASLSD
GVRASQRAAE LALRQYQNGL EDYTRVLNSE LFLVQQQDRL TASRGDVARS VIAMYKALGG
GWEIREGREL LPPGVKKEMR ERTDWSDLLE EPVGKGID
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