Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0113 |
Symbol | hoxW |
ID | 3103299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 119053 |
End bp | 119595 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637169338 |
Product | HoxW protein |
Protein accession | YP_112652 |
Protein GI | 53802645 |
COG category | [C] Energy production and conversion |
COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
TIGRFAM ID | [TIGR00072] hydrogenase maturation protease |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.486904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGGGGC TGCTGGTCTT CGGCTACGGC AACCCGAGCC GGGGTGACGA CGCGCTCGGA CCGCTGTTCC TCGAAGCGCT GCAAATACGG CTGGCAAGCT CGCCAGGGGT GGACATCGAA TTCCTGCAGG ATTTCCAGCT CCAGATCGAG CACGCGCTCG ACCTCGCCGG TCGGGACCGG GTGCTGTTCG TGGACGCCCA CGTCGGCTGC CCCCCGCCGT TCCGGTTCGA ACGGCTCGTT CCCCAGCGCG ACGGCAGCTA CACCACCCAT GCCGTCAGCC CGCAAGCCCT GCTCGAAGTC TACCGGCGCA TCAACCGCGA CGAGCCGCCG CCCGCTTATC TCCTGAGCAT CCGCGGGGAA CGGTTCGACC TGGGGGATGC CTTGAGCCGG TCGGCGGAAT CGAATCTCGA GTCCGCGCTG CGTTTCGCCG AGGTGCTGAT CGGCGCAACG CCGGGCACCG CCTGGGATGC CCTGTGTCCT CGAGGAGAAA TCAGAAATAC GGCTTTTCCT TGGCCTGGTT GTAGCGCTCG ATGCTGCCGG TGA
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Protein sequence | MAGLLVFGYG NPSRGDDALG PLFLEALQIR LASSPGVDIE FLQDFQLQIE HALDLAGRDR VLFVDAHVGC PPPFRFERLV PQRDGSYTTH AVSPQALLEV YRRINRDEPP PAYLLSIRGE RFDLGDALSR SAESNLESAL RFAEVLIGAT PGTAWDALCP RGEIRNTAFP WPGCSARCCR
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