| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0090 |
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| Symbol | |
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| ID | 3104848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 95226 |
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| End bp | 95816 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637169315 |
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| Product | type IV fimbrial biogenesis protein PilV, putative |
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| Protein accession | YP_112629 |
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| Protein GI | 53802685 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.662578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCGGT CTCACCCTAA CGGCTTCACC CTGATCGAAG TACTCGTCAG CGTGTTCATC
TTTGCCGTGG CGCTGCTGGG CCTGGCGGCC CTGCAGATCG CCGCCCGCAA GGCCGCGTTC
GAATCCGCCC AGCGCAGTCT GGCCGCAGCC ATCGGCCAGG ACGTGCTGGA GCGGATGCGG
CTGAACACCG AAGCCCTGTC CGGCTACACC GGGACCCTCA ACGCGAACAC CACGTTCAGC
GACTCGCTCG ACTGCGCGGG GCCGGCCAAC CTGGCAGTCT GCGATCGCCG CGACTTCCAG
CGCAGCCTGC TGGGCACCGC CGAAACGACC GGCACCGGAA CGAATGTCTC CAAAACTGGC
GGGCTGGCCA ACCCCACGCT GTGCGTGACC AGCAGCAATG CAGGCGGCTC CGGCCAGTAC
ACCGTCACCA TCGTCTGGCG CGGCCGCGAG CCTGCCCTGC CCGAAGCAGG GTCGGAAAAC
GCATCTGACA CCTGCGGCAA CGGCCAATAC GGCACCAACA ACGAATACCG CCGGATCTTC
CGGATCAGCA CCTATATCTG CCGCGAAGGC GTCAGCGGAG GATGCATCTG A
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| Protein sequence | MNRSHPNGFT LIEVLVSVFI FAVALLGLAA LQIAARKAAF ESAQRSLAAA IGQDVLERMR
LNTEALSGYT GTLNANTTFS DSLDCAGPAN LAVCDRRDFQ RSLLGTAETT GTGTNVSKTG
GLANPTLCVT SSNAGGSGQY TVTIVWRGRE PALPEAGSEN ASDTCGNGQY GTNNEYRRIF
RISTYICREG VSGGCI
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