Gene MADE_03953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03953 
SymbolhslO 
ID6777936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4261357 
End bp4262256 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content45% 
IMG OID642757404 
ProductHsp33-like chaperonin 
Protein accessionYP_002128237 
Protein GI196158748 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATT TCGATAAATT ACACCGCTTC TTATTTACAC AAGCTAACGT TCGCGGCGAA 
TTAGTTCGCC TAGATGAGAG CTTAAAGAAC ATTGTGCACA GCTATGAATA CCCTGTGCAA
ATTCAAACGT TACTGAGTGA AATGGCGGCA GCGACGTCAC TGTTAACGGC AACGCTTAAA
TTTAAAGGTG AGATTTCACT TCAAATTCAA AGCAAAGGCC CGGTAAGTTA TGCAGTGTTA
AATGCCACTC ACGAGCAAAC ACTGCGCGGT GTAGCACGTT GGGACGAAAC ACTTGAAACC
CTACCTGACA CGTTTTCTGA GCTATTGACC CAAGCCGTTT TGGTTATCAC CATTACCCCA
GATGAAGGCG AGCGCTATCA GGGCGTTGTG GCATTAGATA AGCCATCTTT AGCTGAGTGT
ATCGAAGGCT ACTTTGCACA GTCAGAACAG CTAGCAACCA GTGTTCACCT AATGACAGAT
ATGAGCGACC CTAAAAATGC TAAAGCGTCG GGCGTGTTGC TACAAGTTCT ACCTACCGAT
GCAAGCGCCA CGGATGTATC GCAAGCCAAT GAGTTTGCTC ACATCTCAAA GCTTACCGAA
ACGCTGACCA AAGAAGAGAT GTTTTCTTTG TCGGTTGAAG ACATTTTGTA TCGCCTTTAC
CACCAAGAAG ACGTGGAAAT GTACCCAGCA AAAGACGTAA CCTTTGCGTG CTCATGTTCT
AAAGAGCGAA GCGCAGAAGC GCTGCGTCAT GTGGAAAAAT CTGAACTGCA CGCCATTATT
GCCGAAGAAG GGGCGATAAA AATGAACTGT CAGTACTGCC ATGCAGAGTA CCGTTTCGAC
AGTATCGACG TTGAAGCTAT TCATAACGGT AACTTCGACG TATCGTCATC AAACCAATAA
 
Protein sequence
MSDFDKLHRF LFTQANVRGE LVRLDESLKN IVHSYEYPVQ IQTLLSEMAA ATSLLTATLK 
FKGEISLQIQ SKGPVSYAVL NATHEQTLRG VARWDETLET LPDTFSELLT QAVLVITITP
DEGERYQGVV ALDKPSLAEC IEGYFAQSEQ LATSVHLMTD MSDPKNAKAS GVLLQVLPTD
ASATDVSQAN EFAHISKLTE TLTKEEMFSL SVEDILYRLY HQEDVEMYPA KDVTFACSCS
KERSAEALRH VEKSELHAII AEEGAIKMNC QYCHAEYRFD SIDVEAIHNG NFDVSSSNQ