Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03725 |
Symbol | |
ID | 6778208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 4025229 |
End bp | 4025780 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642757178 |
Product | membrane protein; member of the DedA of proteins |
Protein accession | YP_002128011 |
Protein GI | 196158522 |
COG category | [S] Function unknown |
COG ID | [COG1238] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.241313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTAC GCTGGGCGAG GCATCGCCAC GCAACTAAAT ATTTAGGTGG GTTAAGCTTC TCTGAATCAG TATTCTTCCC CATTCCTCCT GACGTAATGC TAGCGCCAAT GGCGCTTTCG CAGCCAGAAA AAGCATGGCG CTTTGCATTT ATCACAACGA TTGCGTCGAT ATTCGGCGGT ATCGCGGGAT ACTGGTTGGG CTATTTTGCT TTCGATGCGT GGCTTGCGCC TTTAATTGAA CAGTGGGGCT ACTCCCATAA AATTGAAACC GCTATGCAAT GGTTTAAAGA TTATGGCGTG TGGGTGGTTT TCCTTGCGGG GTTCTCGCCT ATTCCCTATA AGATATTCAC CGTAAGTGCA GGCTTTTTGC AAATGGCGTT TTTACCGTTT GTTTTAGCAT CAGCAATAGG TCGAGGCGCT CGCTTCTTCT TAGTTGCAGC GCTAATGAGA TGGGGCGGCA CAGCCATGGA ACAAAAGCTT AGGCAGTATG TAGAAGTTCT CGGTTGGGCC GTAGTTATCC TCGCTGTAAT TGCCTATTTA ATCTTGCGAT GA
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Protein sequence | MALRWARHRH ATKYLGGLSF SESVFFPIPP DVMLAPMALS QPEKAWRFAF ITTIASIFGG IAGYWLGYFA FDAWLAPLIE QWGYSHKIET AMQWFKDYGV WVVFLAGFSP IPYKIFTVSA GFLQMAFLPF VLASAIGRGA RFFLVAALMR WGGTAMEQKL RQYVEVLGWA VVILAVIAYL ILR
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