Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03091 |
Symbol | |
ID | 6777476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3345689 |
End bp | 3346462 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756540 |
Product | putative ATPase and membrane protein |
Protein accession | YP_002127379 |
Protein GI | 196157890 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCACAG GAGAGGTGGG GACAGGAAAA ACCACGGTTT CAAGAAAGCT GTTGCAGCAG CTGCCGGATA ATACCCAAGT CGCCATGATC CTAAACCCAA CGCTATCTGC ATTAGAGCTA TTAGCCACAG TATGCGACGA ATTGGGTTTG GCATATAACT CCGACAAAGC CAGCTTAAAA TACTTCACCG ATTTAATTTT GTCGAAATTA GCGGAAAACC ATCAGGCGGG TATCAATACA GTGTTAATGG TTGATGAAGC TCAACACTTA TTGCCTGAAG TATTAGAGCA GCTGCGCTTA TTAACCAATT TAGAAACCAA CCGTGAAAAA CTGTTAAAAG TGGTGCTAAT TGGCCAGCCC GAGCTACAGC AATTGTTAAA GCGTAACGAG TTGCGCCAGT TGGCCCAACG TATCACTGCC CGTTATCACT TACTTCCTTT AACCGCGCCA GAGGTAAGCG CGTATATTGC GCATCGCTTA AGTGTTGCAG AAGGGGACAT CAGCATATTC AGTAAGTCTA CGCTGCGCGC AGTGCATCAA ATTACTGGCG GGATCCCAAG GGTAATCAAT TTGCTTTGCG ACCGCGCCTT AACGCTATCG TTTACCAAGC AGCATGCTGT GGTTCAAAAG CCCATTTTCT TGGCAGCAGC AGAGCAAATA TTGGGCGAAG ACGTAGTGAG CCAGCGTGTG CAAAGTCAGC GAAAGTGGTA CTTGGTATCC GCCTTTTTCG TCGCCGTTGT ATGTGGTTAC GGGGTGGGGA GTTTGTATGT CTAA
|
Protein sequence | MLTGEVGTGK TTVSRKLLQQ LPDNTQVAMI LNPTLSALEL LATVCDELGL AYNSDKASLK YFTDLILSKL AENHQAGINT VLMVDEAQHL LPEVLEQLRL LTNLETNREK LLKVVLIGQP ELQQLLKRNE LRQLAQRITA RYHLLPLTAP EVSAYIAHRL SVAEGDISIF SKSTLRAVHQ ITGGIPRVIN LLCDRALTLS FTKQHAVVQK PIFLAAAEQI LGEDVVSQRV QSQRKWYLVS AFFVAVVCGY GVGSLYV
|
| |