| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02889 |
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| Symbol | fliF |
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| ID | 6776935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3138972 |
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| End bp | 3140666 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642756338 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_002127179 |
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| Protein GI | 196157690 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAG CAACAGGTAC AAACCTAACG GTTCCTGACC AAAATCAAGC GGTGGACAAC
GAGCCAGAGA ATAAATCTGG CTTTATGGAC ACCCTAGGCA GCGCTGACAT GATGCGTCAA
ATGGCGCTCG TCGTCGTCCT CGTTATTTGT GTGGCTATCG CTATTTTTAT TCTGATTTGG
TCACAAGAGC CTGATTATCG TCCACTCGCG AAAATGGAAA CTCAAGAGCT TATAGAGACG
CTTGATTACA TGGATGCGAA TCAAATTGAA TATAAGCTTG AAGGCAATAC GGTTTATGTG
AGAAGCGATG AGTTCCAAAA TATTCGGTTA GGTATGACCC GTCAGGGATT AACCAATAGT
TCTGATGCGG GCACAGACAT TATCATGCAG GACATGGGCT TTGGGGTAAG CCAGCGGGTA
GAGATGGAGC GCCTTAAACA TGCCCGAGAG CAGCAAATCG CCGCGACAAT TGAAGATATT
GCCAGTATCC AAAAAGCGCG GGTATTGCTC GCCACGCCCA AAGAAAACGT GTTTGCACGC
AGAGAGAAAA AAGCGTCAGC CACTGTGGTG CTAACCGCAA AGCGTGGCGC AGTAATCGCC
GGTGAAGAAG CTGATGCGGT TGTTGATATC GTGGCATCAG CGGTTCAAAA CATGGAGCCG
TCTAAGGTGA CGGTGACCGA CAGTAACGGC CGCTTGCTAA ATTCCGGCTC ACAAGACTCG
ATGAGCGCTC GTGCTAGAAA AGAATACGAA ATTGAGCGCC AGCGCGAGCA AGAGTACTTA
GAAAAAATTG ATGCTATATT AATACCCGTA CTGGGTATTG GGAACTACAC GGCGCAAGCC
GATGTTGCGA TGGATTTCAC TGCGATTGAA CAAACCCAGC GTAGCTACAA CCCAGACCTT
CCGGCTGTTC GAAGCGAGAT GATTGTAGAG GAAAACAGCG TAGGAGGCGG TGTTGGCGGT
ATTCCTGGCG CATTATCAAA TCAACCTCCG CTGGATTCTA ATATCCCAGA AAACGCCGTG
GGCGGTAGTC AACAAACTAT GCCTGGACGC ACGGCAAAAG AGTCAACGCG CAACTACGAA
CTTGATACCA CCATTAGCCA TACTAAAAAG CAAACGGGCG TTATAAGAAG GCTTAGCGTC
TCTGTAGCGG TTGACTATAC TCAGGTAGCA GGCGAAGACG GGGCAATGAC TCCTACACCG
CGTAAACAAG AAGAAATCTT AAATATTCGA AGACTTCTAC AAGGCGGTAT TGGTTTTGAC
GTGACCCGAG GCGACTCGTT AGAAGTGGTA AGTGTACCCT TCACGCGAAT GGATACCGGC
GAGATTGAAG ACGCACCACT GTGGGAGCAA CCCGGTTTTC TGCCAATTCT TAAGTTAGTT
ATTGGTGGCT TGGTTATAAT CGTGCTTATC ATTTTTGTGA TTCGACCTAT GCTGCGCCGT
CTTATCAACC CAGATGAGAC TAATGAGGCC GATGAGTTTG ATGCCGATGA AGGCTTAGAC
TTAGGCGATG ACACAATTAG CATGTTAACG TCTGACTTTG ACGAAGGACA GGTTGGCTTT
GCGCCAGATG GCTCACTTAT GCTGCCTGAC TTGCACAAAG ACGAAGATGT ACTTAAAGCC
GTACGCGCCC TAGTGGCCAA TGAACCAGAA TTATCAGCCC AAGTAGTGAA GGGCTGGTTA
ATGCAAGACG AGTAG
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| Protein sequence | MAEATGTNLT VPDQNQAVDN EPENKSGFMD TLGSADMMRQ MALVVVLVIC VAIAIFILIW
SQEPDYRPLA KMETQELIET LDYMDANQIE YKLEGNTVYV RSDEFQNIRL GMTRQGLTNS
SDAGTDIIMQ DMGFGVSQRV EMERLKHARE QQIAATIEDI ASIQKARVLL ATPKENVFAR
REKKASATVV LTAKRGAVIA GEEADAVVDI VASAVQNMEP SKVTVTDSNG RLLNSGSQDS
MSARARKEYE IERQREQEYL EKIDAILIPV LGIGNYTAQA DVAMDFTAIE QTQRSYNPDL
PAVRSEMIVE ENSVGGGVGG IPGALSNQPP LDSNIPENAV GGSQQTMPGR TAKESTRNYE
LDTTISHTKK QTGVIRRLSV SVAVDYTQVA GEDGAMTPTP RKQEEILNIR RLLQGGIGFD
VTRGDSLEVV SVPFTRMDTG EIEDAPLWEQ PGFLPILKLV IGGLVIIVLI IFVIRPMLRR
LINPDETNEA DEFDADEGLD LGDDTISMLT SDFDEGQVGF APDGSLMLPD LHKDEDVLKA
VRALVANEPE LSAQVVKGWL MQDE
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