| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02839 |
|---|
| Symbol | |
|---|
| ID | 6775700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 3088224 |
|---|
| End bp | 3089027 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642756286 |
|---|
| Product | peptide ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_002127129 |
|---|
| Protein GI | 196157640 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCA TGCAGGTAAA AGATCTCACG TTTATTCACA ATGAAAAGAA ACGCTGGTTA
AAAAGGCCAG AAGTATTTCA ACTGGGCCCT GTGAATTTAA ATGTAAAGCG CGGCGAAACC
ATTGCCATTA TCGGTGAAAA CCGTTCAGGT AAATCACTGC TTGCTAAACT GCTGGTTGGT
GCCTTGCCGG CTGACGCGGG CGAAATTGAG ATTAATACTC ACAAATACTT AGCAAAATAC
CAATCCAAAG ATGGCCAGCA AAAACGTACC CACGATATTA GAATGATTTT GCAGCACAGC
GCGGAGTCGA TGAATCCGTC TGTTCCCGTG GGTAAAATTT TAGATGAGCC CCTACGTTTA
AATACCGGCT TACCTCAAGC AGAACGCAAG CCTATTATTG AGGATATGCT GGTAAAAGTA
GGGCTGCTGC GCGAGCATTA TTACTTTTAC CGGCACATGC TTTCTGATGG TCAACAACAG
CGCGTGGCGC TAGCACGAGC CATTGTTTTA AAACCTAAAG TACTCGTAGC TGACGAACCT
TTCGCGGCAT TAGACCCCTC AATTCGTTCT CAAACCGTAA ACCTTATACT TCAGCTTCAA
CAAGAATTGG GTTTGGCATT CGTCTTTATA AGCCATAATT TAGGTATAGT AAGGCACATT
GCAGATAGGG TGATTGTTAT GGAAGGTGGA GAAATCGTAG AAGAAGGCAA GACAGAAACC
ATTTTCAGAT GGCCGCAGCA TACCCGAACA AAAAAGCTTA TCACTGCTTA TCAGTCGTTA
GTACCGCAAA ACACAATTCG TTAA
|
|---|
| Protein sequence | MDIMQVKDLT FIHNEKKRWL KRPEVFQLGP VNLNVKRGET IAIIGENRSG KSLLAKLLVG
ALPADAGEIE INTHKYLAKY QSKDGQQKRT HDIRMILQHS AESMNPSVPV GKILDEPLRL
NTGLPQAERK PIIEDMLVKV GLLREHYYFY RHMLSDGQQQ RVALARAIVL KPKVLVADEP
FAALDPSIRS QTVNLILQLQ QELGLAFVFI SHNLGIVRHI ADRVIVMEGG EIVEEGKTET
IFRWPQHTRT KKLITAYQSL VPQNTIR
|
|---|
| |