| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02719 |
|---|
| Symbol | |
|---|
| ID | 6775936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2959556 |
|---|
| End bp | 2960449 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642756164 |
|---|
| Product | probable putative transmembrane protein |
|---|
| Protein accession | YP_002127009 |
|---|
| Protein GI | 196157520 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCAG ACGCGATCCC TTTCTGTAAA GACTACCTGT TAAACCACGC CAGTATGCCT
GTTAATGCGC TTCTTGACGA ATTAGGTCTC TTCACATGCA GTGAGTTTCC TACCCCTGAA
TTGCTTAACG AAAAAGTCGC CGAATATCAG GCAAGTTGGC AAGGCCCGAC GTTTAAAGGT
CAACGCTTAT TCAAAGACGA CGAGCAGCGC TATTACGAAA CAATTATTAG CGAAGACAAA
GTCATTCCGA CCCGCGAACT TAGCTGGCAC GACTTATTCA ATGCACTTAT TTGGCTACAA
TTTCCTAAAA CGAAATCTTT GCTCAATGAG TTACATGTTG CCGATATTAA CCGCTATGGC
GTTAACCCAA GAACGGCGCG GCGAAACCGT ATTACTCACT TTGACGAATG CGGAGTGGTG
CTCGCTGTTG AATCACCTAA AGGAAGTGAC TTACCCGTTG TGAAACAGTC GGCACGGGCT
TGTCGCGAAG AGTTTCTATA CCGCCTTGCT CAGCATGAGT GGAAAACAGT GTTTATTGCC
AATCGAGAGA TGTGGTACAC ACAGGTCAGC CCCTTTATTT TTGGTCATGC AAACTTAGAA
ATGATGTTGA ACCCTTTTAT CGGTTTAACG GGGAAATGGC TGGCAGTGTC TGTGCCCTAT
GGTTTTAGTC AGCTCGATAG GTGGCAGCAG CGTGCGCAGT TAGACGAGGC TATGGTCGCA
CGTATTAAAG ATTTAGATTG CTTTGAGTGT GCACCATTGC TGAAACCTTT ACCGCTGTTG
GGTGTTCCTT CATGGCACCA TAAGCAAGAT GAAACATTTT ACAGTAATAG TGACTACTTT
AGGCCACTAA GAGCGGGAAG TAAGCCTACC AAACAACTGC CACTGTGGAC CTAG
|
|---|
| Protein sequence | MQSDAIPFCK DYLLNHASMP VNALLDELGL FTCSEFPTPE LLNEKVAEYQ ASWQGPTFKG
QRLFKDDEQR YYETIISEDK VIPTRELSWH DLFNALIWLQ FPKTKSLLNE LHVADINRYG
VNPRTARRNR ITHFDECGVV LAVESPKGSD LPVVKQSARA CREEFLYRLA QHEWKTVFIA
NREMWYTQVS PFIFGHANLE MMLNPFIGLT GKWLAVSVPY GFSQLDRWQQ RAQLDEAMVA
RIKDLDCFEC APLLKPLPLL GVPSWHHKQD ETFYSNSDYF RPLRAGSKPT KQLPLWT
|
|---|
| |