Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02489 |
Symbol | |
ID | 6778738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2704358 |
End bp | 2705461 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642755928 |
Product | putative mechanosensitive channel protein (MscS family) |
Protein accession | YP_002126779 |
Protein GI | 196157290 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGACA GTGAAGGCGG TGGCGTAACA AGCTTCACGA ACGCGCAATC GTTGCTTTCC TCGCTTTGGG AAAGTTTTGT ATACCGTTTA CCCGGGTTAG CGCTTGGTGC GGTTATCATG GTGGCGTTTA TACTGTTAGC CCCTCATGTG GCAAAAGTGC TGGTAAAGCC CTTTACTCGC ACTACTGCGT CGCCACTGTT ACGTTCGGTT ATTCAGCGCA GCGTAAGCCT TATACTTATC TTACTTGGCA TATATCTATT TCTGTTTTTG GCAGGGTTAA CAGGCTTTGC AATTGCTGTG GTGAGCGGTA CTGGCGTAGT GGGGCTTATT TTAGGTTTCG CCTTTAGAGA TATTGCAGAG AACTTTATAT CAAGTTTACT TCTTACCATT CAAAGGCCGT TTAGAATAGG CGATATTGTT CAAATAAACG AGTTCGTGGG TATTATTCAG AAGGTGACTG CGCGCGCCAC CACGCTGGTT GATTTCGATG GCAATCACAT TCAAATTCCT AACGCGACGA TTTACAAGGG CGTTATTAAA AACCTTACCG CCAACCCGCT TATGCGCGGT CATTTTGTGA TTGGTGTGGG TTACGACTCA GACATACAGC ATGCACAAAA AATTGCGCGT GACGTGACTA ATGCGCAAGA TAACGTGCTG CACGACCCAG AGCCACAAAT TCTTATCGAT GAGCTAGGGG CGTCAACCTA CAACGTTAAA GTATATTTTT GGGTGAATGT TGAGAAAACC AGCGTACTAA AAATGTCGTC TGTCTTAATG CGCAACATTA CCCAAGCGTA CTTAGATGCT GATATTAGCA TGCCAGACGA TGCGCGAGAG CGTATTTTTC CGCAGGGCTT AGCGATTACC CGCACTGATG ACGCACACCC TGAACCTGAA AAACGCGCCA CAGATGAGCA TGGTGAAGGC GGCGCAGCGA CTCGCACCCA GCATAAACCC CAAAGCGATG CAAAGCGCAG CGAAAGGCAT CAATCAGATA GCTCACAAAA CAGCGAAGCG GATGACGTTA CCTCTGAAGC GCATGAGATT AGAGAACAGG CCCGTAAGTC TCGAGACCCC GAGGCCGGTG AAAATATTTT ATAA
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Protein sequence | MQDSEGGGVT SFTNAQSLLS SLWESFVYRL PGLALGAVIM VAFILLAPHV AKVLVKPFTR TTASPLLRSV IQRSVSLILI LLGIYLFLFL AGLTGFAIAV VSGTGVVGLI LGFAFRDIAE NFISSLLLTI QRPFRIGDIV QINEFVGIIQ KVTARATTLV DFDGNHIQIP NATIYKGVIK NLTANPLMRG HFVIGVGYDS DIQHAQKIAR DVTNAQDNVL HDPEPQILID ELGASTYNVK VYFWVNVEKT SVLKMSSVLM RNITQAYLDA DISMPDDARE RIFPQGLAIT RTDDAHPEPE KRATDEHGEG GAATRTQHKP QSDAKRSERH QSDSSQNSEA DDVTSEAHEI REQARKSRDP EAGENIL
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