Gene MADE_02448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02448 
Symbol 
ID6777087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2655812 
End bp2656957 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content38% 
IMG OID642755887 
Productglycosyl transferase, group 1 
Protein accessionYP_002126738 
Protein GI196157249 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0107535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG CGCTCTACCA ACCATGGATC TATTTGTACG GCGGTTTGGA AAAAAGCTTA 
TTAGAAGTCG TAACCCGCTC TCAACATGAC TGGGTTGTTT TTACAGGGCA TTATGAGCCG
GAAAATACAT TTCCAGAGTT CAAAAATGTT GATGTACGGG TATTGAACTC CACTTCCGTA
AAACGAACGC TATTTGGTAC TTTGATTAGT GCTTTTCACA TTGCTCGGCA AAAAATTCCG
GCAGAAGATT TTGACGCTGT AGTTGTGTGG TGTGACGGCT TAGGCGACTT TATTTCATTT
CGTAATCATT CGTTACCTCT TATGAATATT TGTAGTACGC CATTACGTGC AGCATTTGAT
CCTGTGTATG AAAGACAGGT ATTAGCTAAT AGCGGCTTTT TGTATCATCT CAGTTATAAG
CTTTTTAAAT TTGGCTTCAA AATAGTAGAT AAAGCTGCAT GGCGGTACTT CGACAGTATC
ATTACTACAA GCACCGAAGT AAAAAACAGA ATTATTGAAG GCGAGCTTTG TACTGATGAA
TCTAGAATGG TGATGGCATA TCCAGGCATT GAATTCAAAA GTAGCCTTGA AGATGTGACT
TACGAACCAT TTATTCTTTT ACCCGGCAGA ATTATGTGGA CTAAAAATAT TCAGCTAGCT
ATTTCTGCTT TTCTCAAGGC TGATTTAAAT ACCCCTTGGA AGTTGAAAAT TGCCGGTTTC
CTTGATGAAA AAAGCCAAAC ATATTTAGAA GAGTTAAAAG AGCTAGCAAA TCGTTCATCT
AATATCGAGT TTATTATTTC ACCCTCACAT CAAGAGTTGA GCTTACTGTA TAAGCAAACT
GCTTTTTGTT TGTTCCCCCC TTTAAATGAA GATTGGGGTA TTGTTCCTTT AGAAAGTATG
AACCACGCCA AAGCAGTGAT TGCTAACGCA AGTGGCGGAC CGAAAGAGAG CATTGAAAAT
AAAAAAACGG GCTTTTTACT TCAGCCAGAA GTGGACGCGT GGGCAAAAAA AATAAGATTG
TTAGCAGGAG ATATTCCACT TTGTAAGAGC ATGGGTATCA ATGCTAATGA GAGGGTAAAA
TCTTTTTCAT GGAGTGAGTT TGTAAAACGA ATTGATAATA CCTTGTCTAA CATTATCAAA
GAGTAA
 
Protein sequence
MKIALYQPWI YLYGGLEKSL LEVVTRSQHD WVVFTGHYEP ENTFPEFKNV DVRVLNSTSV 
KRTLFGTLIS AFHIARQKIP AEDFDAVVVW CDGLGDFISF RNHSLPLMNI CSTPLRAAFD
PVYERQVLAN SGFLYHLSYK LFKFGFKIVD KAAWRYFDSI ITTSTEVKNR IIEGELCTDE
SRMVMAYPGI EFKSSLEDVT YEPFILLPGR IMWTKNIQLA ISAFLKADLN TPWKLKIAGF
LDEKSQTYLE ELKELANRSS NIEFIISPSH QELSLLYKQT AFCLFPPLNE DWGIVPLESM
NHAKAVIANA SGGPKESIEN KKTGFLLQPE VDAWAKKIRL LAGDIPLCKS MGINANERVK
SFSWSEFVKR IDNTLSNIIK E