Gene MADE_02402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02402 
Symbol 
ID6776416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2598487 
End bp2598933 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content47% 
IMG OID642755841 
ProductCBS domain protein 
Protein accessionYP_002126692 
Protein GI196157203 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.121948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGCGCCA CGGCTGGAGA AATGAAAATG GAATCGTTGC AAGTCAGTGA TTATATGAAT 
ACTCACCCAG TGAAGCTTAA TATCGACATG CCCGTTGCGC AGGCTGTCGA AGTATTATTG
GCCAGCGGAC AAAGCGGAGG CCCGGTACTA GATACCAAAG GAAGGGTGGT TGGCTTTCTT
TCAGAGCAAG ACTGTATTGC TCAAATGATC GCGTCGAGCT ATTACCGAGA GCAAATTTGC
AGAGTGGGGG AAATTATGAA AACCCCCGTG GTGTCTGTAA AGCCATATAT GTCGGTAATA
GAATTAGCGC AGTTATTATT AAAAGAAAAG CCTCGCGTTT ACCCTGTAGT TGATGATGAC
GGAGTGCTTT TAGGCTGCAT TAACCGAACG GCAGTGCTGC GTGCGATAGA CGTCCAGCTA
AATGATGGCT ACCAGCGAGC AGGATAA
 
Protein sequence
MGATAGEMKM ESLQVSDYMN THPVKLNIDM PVAQAVEVLL ASGQSGGPVL DTKGRVVGFL 
SEQDCIAQMI ASSYYREQIC RVGEIMKTPV VSVKPYMSVI ELAQLLLKEK PRVYPVVDDD
GVLLGCINRT AVLRAIDVQL NDGYQRAG