Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02398 |
Symbol | |
ID | 6778017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2592285 |
End bp | 2594990 |
Gene Length | 2706 bp |
Protein Length | 901 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755837 |
Product | putative tonB-dependent receptor |
Protein accession | YP_002126688 |
Protein GI | 196157199 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.835744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA AAACCGCGTA CTCTTCTCTT GCACTTGCTT GCGTAACGGC ACTTGGCCTC AGCATTGCTT CTCCTGTTCT GGCGGCAGAT GGCGTAATCA TTGGCTCTGT AAAAGATGCC GCTAAGGCCC GAAGCTACAA CGGCGCTAAA ATAAAGCTTA TTGAATTAGG ACTTGTTACT GAGGCAGGCC GAGACGGCAC TTTTCGCTTT CCCTCTATTC CTAAAGGCAC TTACACGCTA GAAATTTCTT ATTTAGGTGA AGATACCGTC ACGCAAACCA TCAAGGTGGA AGATAATGAC ATAGCGCGGG CCTCAGTCGA ATTCGGTAGC GGTGAGACCA TTGACGAGAT ACTGGTACGA GGGCAACGAA GCGGACAGGC AAGCGCCATT AATCAGCAGC GAGTTTCTGA CCGCATATCT TCGATTGTTT CTGCAGATGC CATTGGCCAA TTCCCTGACC AAAACGCAGC AGAATCGCTA CAGCGCTTGC CCGGCCTCTC TATTGAACGT GACCAAGGTG AAGGTCGCTT TGTAGGGATC CGCGGTATCG ATCCAAACTT AAACAATGTC ACCATCAACG GGTTAAACAT TCCTTCGCCT GAGTCTGGCG TGCGCTCTGT TGCCCTAGAT GTCATTCCTT CAGAACTCAT TCAAACACTA GAAGTATCGA AATCTGTCAC ACCTGATATG GATGGTGATG CCATAGGTGG TTCAGTAGCC GTTAAAAGCG TTAGTGCGTT TGACAAGGCT CGCGACACCG CAAGCGTTAC TGTTCAAGCA AGCCAAAATG ATTTGCGCGA TGAAACCAGC CCAAAAGTAT CAGGTACCTT TACCAAGAAA CTTTCATCTA AATGGGGCGT TGCCGGTGCT GTTTCATATT TCGACAGAGA CTTTGGTTCT GATAATGTAG AAAGCAACGG TGACGACGAA CTTGAACAGC GCCACTACAC CATTACACGG GAGCGTTTAG GTAGTGCGTT GAACATAGAT TTTCGCCCTG ACTTCAACAA CCAATATTTC TTACGCACCT TATACAGTGA ATTTTCTGAT GATGAATATC GCCAAGGCAA TATCTTCACC TTTGACGGCG AAGATTCGGA AATTGAAAGA GAAAGTAAAG ATCGTTTTGA AAGCCAAAGT ATCTTCACGG TCGCATTAGG CGGTGAACAC CAGCTAGATA CATGGGAAGC GAACTGGCAG CTAGGCTACG CAAAATCTGA CGAAGATGAA CCTGACGCTT TGTACTATAT ATTTAAAACA GAGAATGACA GCATTGATGC CGACTTAAAC ACCATGCGCC CTACTGTTTC ACAGAATGCT GATGCCATGG ATTTGTCGAC CTATGAAGTA GATGAAATAA GCTTTGAAGA TAACTACACC AAAGATACCG AAACCAGCAT CAAATTTGAT GCGGCGCGCC CTATTAATGT AGGTGGCTAC ATCGGTGAAT TAAAATTTGG TTCAAAATAC CGCAGCCGAG AGAAAGACCG AGACAGCAGT ATTACTATTT TCGATGGTGA CTTTGATGAC CTAGATGCCG CTCAATTTGG CGCAGCAAGC CCAGATTATT CACTCGACAA TTTCGGTCCA GGGCTTAACC GAGGCGTAAT GCGCAGTTAT TTTAACGATA ACCGTGAGGG CCTTGAGGTT GATAGTCTAA ACTCAGACGT TGAATCTCGC GGTGCTACGT ACGTAAACGA AGAAGACATC TTTGCCGCTT ATATCATGGG CAGCGTAGAT ATTGAAAAGC TTCACTTGGT CGCTGGTGTT CGCTACGAGC GTACTGACTT TTCAACTTCG GGCATGCGCG TAGAGCTTGT TGAAAACGAG CAAACTGACG TAGAAGAAGT GGTGAATACG CCTTGGGAAG CGGAGCGTGA CTATGATCAC TGGCTACCTA GCGTGAACGC TAGATACACA TTTTCTGACA AGCTACAGCT TCGCGCTGCT TACACTCAAA CCATTTCTAG ACCTAAGTTT GAAGATGTCG CAGCATTTCA AATAATCGAA AGCAAAACAG AAGAAGACGA TGGTGTATTT GTTACTGAAC GCGAAGCAGA AGTCGGTAAC CCAGAGCTTC AGCCTTACGA AGCTCAGAAC GTTGACTTAT CTCTTGAATA CTACCCTGGC GACGTTGGCG TCATTTCAGC CGGTCTTTTT TATAAGAATA TCGATAATTT CGTTGTTTAT GCCGATGTTG CAGGTACCGC GGGCTGGGAA GGCTTCGAAG AGGTCATTCA ACCCATCAAC GGCGACTCTG CAGATTTGAC CGGCTTAGAG CTCTCTTGGG TAAAAGCCTT TAACAACGGT TTTATCGTGT CTGCCAACGC TACTTTCACC GACTCTGAAG CAACCACCTT TTTGGATGGC GAGAAGTTTG AAACGCAGCT ACCGAATCAG TCTGATCGCA TTGGCAACTT AACCATAGGC TATGAGGCCA ATGATTTTAG CGTACGACTT GCCACCACCT ATAAAAGTGA AAACTTTGAA GAAATTGACG GCGATATGCT GAGATTTGAA GATGACCATG TACAAATGGA CTTCATGGCA CGTTACTACA TTAACGACAC CATGCAGGTA TATTTTAACG GCATTAACTT AGGTGATGAA CCTTTCTACA ACTACTTCGA TACGCGCAGT CAAAACGCGC AGTACGAAGA GTATGGCCGT ACGTTCGAAC TAGGTTTTAC TTGGCAGCTA AACTAG
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Protein sequence | MKIKTAYSSL ALACVTALGL SIASPVLAAD GVIIGSVKDA AKARSYNGAK IKLIELGLVT EAGRDGTFRF PSIPKGTYTL EISYLGEDTV TQTIKVEDND IARASVEFGS GETIDEILVR GQRSGQASAI NQQRVSDRIS SIVSADAIGQ FPDQNAAESL QRLPGLSIER DQGEGRFVGI RGIDPNLNNV TINGLNIPSP ESGVRSVALD VIPSELIQTL EVSKSVTPDM DGDAIGGSVA VKSVSAFDKA RDTASVTVQA SQNDLRDETS PKVSGTFTKK LSSKWGVAGA VSYFDRDFGS DNVESNGDDE LEQRHYTITR ERLGSALNID FRPDFNNQYF LRTLYSEFSD DEYRQGNIFT FDGEDSEIER ESKDRFESQS IFTVALGGEH QLDTWEANWQ LGYAKSDEDE PDALYYIFKT ENDSIDADLN TMRPTVSQNA DAMDLSTYEV DEISFEDNYT KDTETSIKFD AARPINVGGY IGELKFGSKY RSREKDRDSS ITIFDGDFDD LDAAQFGAAS PDYSLDNFGP GLNRGVMRSY FNDNREGLEV DSLNSDVESR GATYVNEEDI FAAYIMGSVD IEKLHLVAGV RYERTDFSTS GMRVELVENE QTDVEEVVNT PWEAERDYDH WLPSVNARYT FSDKLQLRAA YTQTISRPKF EDVAAFQIIE SKTEEDDGVF VTEREAEVGN PELQPYEAQN VDLSLEYYPG DVGVISAGLF YKNIDNFVVY ADVAGTAGWE GFEEVIQPIN GDSADLTGLE LSWVKAFNNG FIVSANATFT DSEATTFLDG EKFETQLPNQ SDRIGNLTIG YEANDFSVRL ATTYKSENFE EIDGDMLRFE DDHVQMDFMA RYYINDTMQV YFNGINLGDE PFYNYFDTRS QNAQYEEYGR TFELGFTWQL N
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