| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02320 |
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| Symbol | |
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| ID | 6777448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2507209 |
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| End bp | 2507973 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642755759 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002126610 |
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| Protein GI | 196157121 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.278607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCAC TACTCGACTT TACGGGGCAA GTAGTACTAA TCACCGGCGC AGGCAGTGGC
TTTGGCCGCT TGCTATCGTT AGGTCTTGCT AACCGGGGCG CGAAACTGGT TCTTTCTGAT
ATCAATGAAA CAGCCCTTGA AGAAATTCAG CGCGATGTAA GTACATTAAC CGATGTTGCA
GTGCTAGCTG GTAACATCGC GAGCGAATCA CTCAATAAAG AGCTCGTTAA CAAGGCGATG
GAGACATTCG GCCGATTAGA CATTGCAGTC AACAATGCGG GTATTGCTCA TCAGCCCGCT
CCTGTTCACC AGATGACAGA AGAAATCATA GACGCTCAGT TTGCCGTAAA TGTAAAAGGT
GTTATGTTCG GCATGAAATA TCAGATTCCC GTCATGCTAG CGCAAAAACA AGGACACATA
TTAAATGTAA GTTCTCTTGC CGGTTTGGGC GGCGCGCCTA AAGGCGGCGC TTACGCGGCG
GCGAAGCATG CGGTTTCAGG TATTACCCGA ACTGCTGCCG TTGAATATGG GCGTAAAAAT
GTAAGGGTTA ACGCAATTTG CCCGTTCTAC AGCCCTACCA ATATACTCAA TGTGGACGGC
TATAACACGC CTGAAGCCCG CGAACAGCTG GGTATGGGTA GCCCAATGAA GCGTTTAGGC
GAGCCTCAAG AAATCGTCAA TACCATGATG CTCATGCTGT CACCTGGCAA CAGTTACATG
AATGGACAAA CCATCGCCGT AGATGGCGGT GTTACGGCGT GGTGA
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| Protein sequence | MDALLDFTGQ VVLITGAGSG FGRLLSLGLA NRGAKLVLSD INETALEEIQ RDVSTLTDVA
VLAGNIASES LNKELVNKAM ETFGRLDIAV NNAGIAHQPA PVHQMTEEII DAQFAVNVKG
VMFGMKYQIP VMLAQKQGHI LNVSSLAGLG GAPKGGAYAA AKHAVSGITR TAAVEYGRKN
VRVNAICPFY SPTNILNVDG YNTPEAREQL GMGSPMKRLG EPQEIVNTMM LMLSPGNSYM
NGQTIAVDGG VTAW
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