| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02194 |
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| Symbol | |
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| ID | 6779134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2351953 |
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| End bp | 2352537 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642755628 |
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| Product | membrane protein, Rhomboid family |
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| Protein accession | YP_002126484 |
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| Protein GI | 196156995 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.411202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTCAC TGCCGTTTTC GCTTAAGTAT AGTGCTGGCC CCTTACTTAT TGCGCTATGT
TCTCTTATCG CGTTTTTCTT TGAACCCTTA TCGGGTAATT ATTTAGCTTA CGACCGCTTC
GCCATTCAGG GTTTAGAAAC GTGGCGAATA GTGAGTGGCA ACATCGTTCA CACTAATGGC
TACCACCTGC TTTTAAATAT AGCGGGTCTA GCACTTTTGT GGGCGTTACA CGGCGAACAT
TATCGCGTTG GTTTGTTCTT GAAAGTCTTT GTGTGGTGCT GCTTAGGCAC CAGTGTTGGG
CTTTACTTTT TTTCACCAGA CCTTATTTGG TATGCGGGGC TTTCTGGCGC ACTTCACGGC
ATTTTTGCAT GGGGCGCCTG TGTTGATATT AAGGAAAAGA TGAAGTCGGG TTGGTTACTA
CTTATTGGAT TAGCGATTAA AGTGGGATAC GAACAAATAG ACGGTAGTAG CGAACAAGTC
GCTAACCTTA TTGATGCTAA AGTTGCTGTC GATGCGCATT TATTCGGAGC CCTTACGGGT
ATCACCATCT TTTTGCTGAT GTTTATTACG GCAAAGCGTA TATAG
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| Protein sequence | MNSLPFSLKY SAGPLLIALC SLIAFFFEPL SGNYLAYDRF AIQGLETWRI VSGNIVHTNG
YHLLLNIAGL ALLWALHGEH YRVGLFLKVF VWCCLGTSVG LYFFSPDLIW YAGLSGALHG
IFAWGACVDI KEKMKSGWLL LIGLAIKVGY EQIDGSSEQV ANLIDAKVAV DAHLFGALTG
ITIFLLMFIT AKRI
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