| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02089 |
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| Symbol | |
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| ID | 6776074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2257233 |
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| End bp | 2258405 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642755526 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002126385 |
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| Protein GI | 196156896 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.569859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATTC AGCCTTCAAT AACCGCTGCA CCGGCCCGTA GCCTTCATTT TGCCGAAGTT
TTGATGGCGA GAGAGTCCAT AACGCCCGTT GACGCAGGGT GTCAAAGTTA CCTCATGTAT
AAGCTTGAAA AGCTCGGGTT TGTCTGTGAG CGTCACACGA TTAATGGTGT TAAAAACCTC
ATTGCCAAAT GGGGGGGTGG CCCGTTACAT TTCGCGTTTA GTGGTCATAC TGATGTGGTA
CCGCCAGGCC CTCTTGAGAA ATGGAAGTCG CCTCCCTTCA GCCCTGTTGT AAGCCAAAAT
AAATTATATG GCCGAGGGGC TGCGGATATG AAGACTGGAA TTTCAGCCAT GCTAGCAGCA
ACCGAACGGG CAATTGCTTC GCTAGATGAA CGTGAGGTGA CGTACTGGTG GCTTATCACC
AGTGACGAAG AGGGAGAGGC TGAATGGGGC TCTAAATGGA TAAACGAGTA TTTGACCAAA
CGTAATGTTC AACTTGATAT GTGCTTGGTC GGTGAGCCTT CGGCGACTAC TCAAACCGGT
GATACTATTA AAGTAGGGCG CAGAGGGTCG CTCTCAGGCA CAATTACTGT TGCGGGTAAA
CAAGGTCACG TTGCATACCC CAAAACGGCT GTTAATGCTA TCCACAAAGC CAGCAATATC
GTTAATGCGC TCACCCACTA TCCCTTCGAA GAGGGAAGTG ATGACTTTCC AGGTACCACG
CTTCAAATAA CGCATATGGA CACGGGAAGC TTTACCGATA ATATCGTGCC TAGTGCGGTA
AGAATAGAGT TTAACGTACG CTACTCATGG CAATACAACC AAGGTAGTTT GGCTGAATTA
CTTCGCCAAA TCATCAGTTC GGTAGATATG TCTGCATTAG TTAGTTTTTC GAGGCCTTGC
GAAGCCTATT TAAGTAAGCC ACATAACAAC GCCAAACGTT GTCTTATTAC TAGCGTAGAA
AAAGCTATTA AAGCGGCAAC AGGGCGTTAT CCCGTAATCA GTACTTCGGG TGGCACTTCT
GACGGGCGAT TCTACGCCAG CGAAAAAACG CAAGTTGTAG AGGTGGGGGT GCCGAATGCC
ACAATTCACC AGGTAAACGA ACATATTCAC CTGTCAGACT TACTCACTCT TGAAGATATC
TACACTGATA TCCTGCTTAG CTTAAGCAAA TAA
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| Protein sequence | MSIQPSITAA PARSLHFAEV LMARESITPV DAGCQSYLMY KLEKLGFVCE RHTINGVKNL
IAKWGGGPLH FAFSGHTDVV PPGPLEKWKS PPFSPVVSQN KLYGRGAADM KTGISAMLAA
TERAIASLDE REVTYWWLIT SDEEGEAEWG SKWINEYLTK RNVQLDMCLV GEPSATTQTG
DTIKVGRRGS LSGTITVAGK QGHVAYPKTA VNAIHKASNI VNALTHYPFE EGSDDFPGTT
LQITHMDTGS FTDNIVPSAV RIEFNVRYSW QYNQGSLAEL LRQIISSVDM SALVSFSRPC
EAYLSKPHNN AKRCLITSVE KAIKAATGRY PVISTSGGTS DGRFYASEKT QVVEVGVPNA
TIHQVNEHIH LSDLLTLEDI YTDILLSLSK
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