Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01938 |
Symbol | |
ID | 6775792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2087822 |
End bp | 2088070 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642755374 |
Product | putative signal transduction protein with EFhand domain |
Protein accession | YP_002126236 |
Protein GI | 196156747 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [R] General function prediction only [T] Signal transduction mechanisms [Z] Cytoskeleton |
COG ID | [COG5126] Ca2+-binding protein (EF-Hand superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00303105 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGTGA GCACTCAACT TTCAGAATCT AAAATTGAAG AAATTAGGAA GGACTTTAGC TTTTTCGATC GTGATGGCAA TGGCCAAATC GATTTGCCGG AGTTCATCGA GCTTCTAACC GTAATTTCAC CAAAAACAAA AGCTAGCCAC GTACAAGAAG GCTTTAAGCT TATCGATAGT AACGACGATG GTTACATCGA CTTTGAAGAG TTTTTGGAGT GGTGGCAAGA AGGGTGGTGG GAATACTAA
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Protein sequence | MRVSTQLSES KIEEIRKDFS FFDRDGNGQI DLPEFIELLT VISPKTKASH VQEGFKLIDS NDDGYIDFEE FLEWWQEGWW EY
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