Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01807 |
Symbol | |
ID | 6775940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1942760 |
End bp | 1943482 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755243 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_002126105 |
Protein GI | 196156616 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAA ATTCAGTAAT ATGCGCAGAT GCGTTGACCG TGCGCGTTGA AAACCGCACG CTTTTAGATA ATCTAAACTT CAACGTTGGT AAGGGCGAAG TTTTCGCGCT TTTAGGCGGA AATGGTGCCG GTAAATCTAC TACACTTAAA ACCTTTTTAG GTTTGATGAA AGCATCTCGC GGTAGCGCTA CTGTGTTAGG GCATAACGCC ACTACTCACC CTAACGATGT TCAAAAATCT GTCGCTTACT TGCCAGAATC GGTCACTCTT TATGGTCATC TTTCAGGCTT GGAAAATATC CGCTACTTTC TTTCGGTAGC TGGTGTAGAA AAATCAGACG AAGACATTTT TGCAGCACTT CGCAAAGTAG CTCTTCAAGA AGATTCATGG AATAAGGCGT TATCGAACTA CTCGAAAGGT ATGCGCCAGA AAACCGCGAT TGCGCTTGCC CTATTGCGCA ATGCACCCGT GCTGTTTTTA GATGAGCCTA CATCAGGGTT AGACCCTGCC GCTATTGACG AGTTTAATGC GTTGGTGTCT GAGCTAGCGG CCAACGGCGC TACCATTTTT ATGGTTACTC ATGACGTATA CGGCGCTTGC CAAGTCGCTC ACCGCATTGT GCTTTTAAGC AACGGTAAAC TAACTGGTTC TTTCGAGCGC ATTGGCGATA TGCCCATTGA TACTGAAGCC GTACACGCAG CATTTGCAGG GCGCAAAGCA TGA
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Protein sequence | MQTNSVICAD ALTVRVENRT LLDNLNFNVG KGEVFALLGG NGAGKSTTLK TFLGLMKASR GSATVLGHNA TTHPNDVQKS VAYLPESVTL YGHLSGLENI RYFLSVAGVE KSDEDIFAAL RKVALQEDSW NKALSNYSKG MRQKTAIALA LLRNAPVLFL DEPTSGLDPA AIDEFNALVS ELAANGATIF MVTHDVYGAC QVAHRIVLLS NGKLTGSFER IGDMPIDTEA VHAAFAGRKA
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