Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01714 |
Symbol | |
ID | 6775574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1839901 |
End bp | 1840530 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642755147 |
Product | chemotaxis protein CheY/response regulator receiver domain protein |
Protein accession | YP_002126012 |
Protein GI | 196156523 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCA TGTACTACGA GGATGGAACC GCTTTAGAAC TGCTAAAATT CATAAAAGAA GATGAAGCGT TTAAAAGTAT TCCTTTCATG CTTGTGTCCA GTGAAAATAG ACTCAGCAAA TTAGAAGAGT TTAAACAGGC AGGAGTGGCG GCCATTCTAC CTAAACCCTT CGAACCTCTC CATCTGTCTC GCGCGCTTAA TGCAAGCTTA GATTTAATTA ATCACGACGA ACTTGAGCTG GATTTATTCG ACGTTCACGA CGTCCGCGTA TTGCTTGTTG ATGACAGTAA GTTGGCAAGA AATCATATAC GTCGAGTTCT TGAAGGCATG GGGCTACAGC GTATTCGAGA AGCTGAAAAT GGTGCCGCTG CACTTACGCT CATTAAAGAC GAGCCTTTTG ACTTAGTAGT TACCGATTAC AACATGCCCG AAATGGACGG CCGCGAGCTG TCTGAGTTTA TACGCTTTAA CCCCGAGACC ACCCATATCC CTATTATTAT GGTGACCTCA GAGGCAGCTG ATAGTGCGCA TATGGCAAAT ATCCAGCAGA CCGGTGTTAA TGCACTATGT GACAAGCCAT TTGAGCCAAA TGAAGTAAGA CAAATGCTAT CTGCCCTACT CGGGAATTAA
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Protein sequence | MSAMYYEDGT ALELLKFIKE DEAFKSIPFM LVSSENRLSK LEEFKQAGVA AILPKPFEPL HLSRALNASL DLINHDELEL DLFDVHDVRV LLVDDSKLAR NHIRRVLEGM GLQRIREAEN GAAALTLIKD EPFDLVVTDY NMPEMDGREL SEFIRFNPET THIPIIMVTS EAADSAHMAN IQQTGVNALC DKPFEPNEVR QMLSALLGN
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