Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01603 |
Symbol | |
ID | 6777433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1719690 |
End bp | 1721063 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642755035 |
Product | Fumarase |
Protein accession | YP_002125901 |
Protein GI | 196156412 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00674477 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCGA CACGCACAGA ACGCGACAGC ATGGGAGAGC TTGAAGTACC CAAAAACGCA CTATATGGCG CGCAAACGCA ACGGGCTATA AACAACTTCC CCGTAAGCGG TCAGCAAATG CCAGAGGCAT TCATTCGCGC ACTCATCACC GTTAAAAAGG CAGCGGCGCA AGCAAACATG AAACTTGAAG CACTAACCGT TGACCGCGGG CAAGCCATCG TTAACGCGTG TGATGAACTT TTAGCAATGG ATGATGTATT AGTACACTTT CCGGTAGATG TGTTTCAAAC CGGCTCTGGG ACGAGTACTA ACATGAATGC GAACGAAGTG ATTGCGCAGC TAGCCTCACG TAACGCGAAT GAAAAAGTAC ACCCCAACGA TCATGTAAAC TATGGACAAA GTTCTAACGA CGTAATACCC ACCACCATTC ATGTAAGTGC GGCAATTGCC CTATCGGGCG AACTCATCCC TGCGGTCGAA AGCTTAATTG AGGTGATTGA AGTCAAAGCA GAGTCTGTGG CGCAATACTG CAAGACAGGG CGTACACATT TAATGGATGC TATGCCTGTT CGTATGGACC AAAGCCTAAT GGCGTGGTCG GCGCAGTTAA AACAGCAGCT AGCAACCCTT CGCTCAGTGC AGCCCGCAAT TCAAACCCTA GCCCAAGGGG GGACCGCAGT AGGGACGGGG ATAAACGCCC ATGCCGACTT TGCCCCAGCG TTTTCTGAAA CGTTAAAAGA ACTTACTGAT ATTCCGTTTA CGCCAGCAGA TAATTTTTTT GCACTTATCG GCTCGCAGGA TACGGCGGTA ACCTTATCTG GTGCGCTGAA AAGCTTAGCG GTGACGTTAA TGAAAATCGC GAACGATTTG CGCTGGATGA ATTCCGGCCC GCTAGCTGGG CTTGGCGAAA TAGCGTTACC GGCATTACAG CCTGGCTCGT CTATTATGCC TGGCAAGGTG AACCCGGTAA TTCCCGAAGC CGTGGCGATG GCTTCTGCTC AGGTTATTGG GAATGATGCG GCCATAACCG TGGGCGGCCA GTCTGGTAAC TTTGAGCTTA ATGTGATGCT GCCAATGATT GCGACCAACT TGCTTTCAAG TTTGTCGCTA ATGACCAACA GTGCAAGCCT TATCGGCGAA CAGGCGATTA AAGGGTTTAC CGTTAACCAG GATAATTTAG AAGAAGCGCT TTATCGAAAC CCCGTACTTG TAACCGCCCT AAACCCGGTT ATTGGCTACG CTAAAGCTGC GGAAATTGCA AAAACCGCTT ATAAGGAAAA CAAGCCGGTT ATCGATGTGG CCGAGGCGAT GACAGATATT CCCAGAGACG AGTTGGTACA ACTGTTAGAC CCTGAAAAGT TAACCCGGCC TTAA
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Protein sequence | MTATRTERDS MGELEVPKNA LYGAQTQRAI NNFPVSGQQM PEAFIRALIT VKKAAAQANM KLEALTVDRG QAIVNACDEL LAMDDVLVHF PVDVFQTGSG TSTNMNANEV IAQLASRNAN EKVHPNDHVN YGQSSNDVIP TTIHVSAAIA LSGELIPAVE SLIEVIEVKA ESVAQYCKTG RTHLMDAMPV RMDQSLMAWS AQLKQQLATL RSVQPAIQTL AQGGTAVGTG INAHADFAPA FSETLKELTD IPFTPADNFF ALIGSQDTAV TLSGALKSLA VTLMKIANDL RWMNSGPLAG LGEIALPALQ PGSSIMPGKV NPVIPEAVAM ASAQVIGNDA AITVGGQSGN FELNVMLPMI ATNLLSSLSL MTNSASLIGE QAIKGFTVNQ DNLEEALYRN PVLVTALNPV IGYAKAAEIA KTAYKENKPV IDVAEAMTDI PRDELVQLLD PEKLTRP
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