| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01500 |
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| Symbol | |
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| ID | 6778971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1608511 |
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| End bp | 1609167 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642754936 |
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| Product | response regulator (activator) in two-component regulatory system wtih UhpB, regulates uhpT expression (LuxR/UhpA family) protein |
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| Protein accession | YP_002125803 |
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| Protein GI | 196156314 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAC TGATCATTGA CGATCATGAG ATAGTACGGG ACGGAATCAA AGCGCTCATT
GAACAAGAGT ATGGCTGGCA CGTTGTTTAT GCGGTAGATT CGATAGGGGC GCTTCCCTCC
TACGCATCGT TTGATGAAGT CGATGTCGCC ATTTTGGATA TCTCACTGGT AAATGAAAGT
GGCTTCGACA CCCTGGTAAA GATTAAGCAG CAAGCGCCTT TTGTAAAATG CTTAATGCTT
AGCATGTACG AACATGTCGG CTATATCAGC AAAGCGCTCG AACTTGGAGC CGACGGCTAC
GTAACGAAAA ACGCAGCGAC GAAAGAGTTA ATGAACTCAT TAGAGTCGCT GGAAAGAGAT
GAAAACTACT TAAGCTCTGA TATTAGCAAG AAATTAGCAT TTGGAGACAA GTGCTTAACC
TCGCTCCTCA CCGATAGAGA AAAAGAAATT TTTCTACTTT TGGCAAAAGG GTTTCAGCCC
AAACAAATTG CCTACCACAT CGATACCGCC CCCAAAACGG TCATGGTTCA CAGAACGAAT
ATTTATAAAA AATTAAACGT AACCTCTCAG TTCGGATTGC TAAGAATTGC ATTGGAAATA
GGTTACCTTG ATGTTTACGA TGTCATTAAT GACGATGCAT TAGTCAAAAC CATTTGA
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| Protein sequence | MNILIIDDHE IVRDGIKALI EQEYGWHVVY AVDSIGALPS YASFDEVDVA ILDISLVNES
GFDTLVKIKQ QAPFVKCLML SMYEHVGYIS KALELGADGY VTKNAATKEL MNSLESLERD
ENYLSSDISK KLAFGDKCLT SLLTDREKEI FLLLAKGFQP KQIAYHIDTA PKTVMVHRTN
IYKKLNVTSQ FGLLRIALEI GYLDVYDVIN DDALVKTI
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