Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01382 |
Symbol | |
ID | 6776855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1479422 |
End bp | 1479937 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642754819 |
Product | outer membrane protein, OmpH family |
Protein accession | YP_002125690 |
Protein GI | 196156201 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00169633 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACAGT TGGTTAAACA TATCGTTGCA GGAGCAATGT TGGGTAGCGC TTTAGTTAGT ACGTCTGTAA TGGCGGAGCA GAAAGTGGCT GTAGTAGACG TTCAAGGTAT TTTTCAAGCA ATGCCTCAAG CGGCTGAAAT TCAAAACGCT ATCCAAGCTG AATTTAAAGA TCAGCTTGAA GAAGTTAATC AACTTCAGCG CGACGGTCAG TTCTATGCCG AGCGTCTTCA GCGCGATGCA GCGACAATGA GCGACACAGA GAAGAAAGAA CTAGAACAAA AAATCTTGTC AGTACGTGAA GAGTTGTCTA AAAAAGGTCA ACCTCTTCAA CAGAACATCC AACGTCGCAG CAACGAAGAG CGCAATAAAC TACTTGGTCT TATCAAGCAA GCCATCGACT CTGTTGCCGC TAAGCAAGGT TACGACCTAG TACTTAATGC AGGTGCAGTT GCATTTGCAA AAGAAGAACA CGACCTATCT GAGCAAGTTC TTCAGCAGGT TAGCAAAACT AACTAA
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Protein sequence | MKQLVKHIVA GAMLGSALVS TSVMAEQKVA VVDVQGIFQA MPQAAEIQNA IQAEFKDQLE EVNQLQRDGQ FYAERLQRDA ATMSDTEKKE LEQKILSVRE ELSKKGQPLQ QNIQRRSNEE RNKLLGLIKQ AIDSVAAKQG YDLVLNAGAV AFAKEEHDLS EQVLQQVSKT N
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