Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01237 |
Symbol | |
ID | 6777854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1328532 |
End bp | 1329059 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642754674 |
Product | putative hyperosmotically inducible periplasmic protein |
Protein accession | YP_002125545 |
Protein GI | 196156056 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.315155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATA AATGGGAAAA AGGTGCCAAA GACGCATGGA TAGACGGTAA AGCCGAGGCG ACGCTGTTAT TTAACGGCAA CCTTGACTCT TTTGACATTA ATACAGACGT TAAAAACGGT AACGTCGTTT TAACCGGTAA GGTTGAAAAC TCTGTCGATA AAAAGCTGGC AGAAGAGCTA GTAGCAAATA TCGACGGCGT AACTTCTGTA GACAATAAGC TTACCGTTGT TGCTGATAAC GATATGCATT CTGACATGTC AGATGACATG GAAGAAGGCG TAGAGGAAGG TACGAGTGAA TTGACAGATG CAAAAATTGC AACAGTTATA AAAACTCGTC TATTAATGGA CACCGACATT TCGGGCTTCG ACATCGATGT TGATGTGGAA AACGGCATTG TGAAGCTAAC CGGTGAAGTT GATTCCGACG CTGAGCGTGA CCTAGCAGTG GAAATTGCTA AAAACGCGTC AGATGTTAAA GACGTTGAAA GTGACCTACG TGTTGTTACT GAAACTGCAA TGAATTAA
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Protein sequence | MDNKWEKGAK DAWIDGKAEA TLLFNGNLDS FDINTDVKNG NVVLTGKVEN SVDKKLAEEL VANIDGVTSV DNKLTVVADN DMHSDMSDDM EEGVEEGTSE LTDAKIATVI KTRLLMDTDI SGFDIDVDVE NGIVKLTGEV DSDAERDLAV EIAKNASDVK DVESDLRVVT ETAMN
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