Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00634 |
Symbol | |
ID | 6778901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 658051 |
End bp | 659481 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754069 |
Product | outer membrane component of multidrug efflux pump |
Protein accession | YP_002124946 |
Protein GI | 196155457 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.253495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGCGC GAAGCTTTAT CTCGTTATTA TTGGCACTCG CGCTTTTGGG CAGCGTTAGC AGTGCTAAGG TACTGGCGCA AAGTCAAACT ACACAGCCCG CACCTTCTAT AGAAGGGTTA ATAGAAAGCA TGGTGAATTA TCACCCTTAT GTGCTTGCGA TAAATGAAGG TAACTACCAA GCCGCGGCTG AACTTGAAAT TGCCAGAAGC AGTTTCGACC CTTTTATAGA ACAGAAAACG AAAAGCCGCG TATCAGGTTA TTACGATGGA ACCAATTTAA CCCAGCGCTT TACTAACCCC ATAGAGGATT ACAATGCCTC GGTTTTCGGT GAGTACCGCA TCGCAGGTGG TGATTTCCCT AGCTACGAAG GATATTACGA TACGCTATCT GGCGGAGAAG CAAGTGTTGG CATTGCCATG TCATTGCTAC AAAACCGCGA AATAGACAAA CGCCGAACCG CGCTAAGAAA TGCGGGGCTA GCGTCATCCC AATGGCAAGC ATTAGCAAGC AGTCTAATTA ATGACTTTGT ATATAAAGGG GTAAGTGAGT ATATCGCGTG GTATGAAAGT GCCCTGCAAA TAGACGCGGT AACCGAATTG CTTAATACCG CTTTTGAACG TGAAAAAGCC TTGGTTACAC GGGTAGAAAA AGGCGATTTA GCCAGTATCG TGCTAACCGA GTTCAAAGCA AACTTGCTAC AGCAGCGTTT AACCTTGGCT GAACTAAAAC AAAAGCGGGA TATGCATGCG CAAATGCTGT CTTTTTACTG GCGTTCGCCA AGCGGTGACA TGCAAGCGGT CAAAAGCGAT AAACCACCAA AAGACATTAA CTGGCCATAT TGGGTGGGCA ACGGTCAACT TGTCACACTG CGCAATGCGC TGCGCGAGCA TCCCGAACTG GATGTTATGA AGTTAGAGCA GCAGGTGGTA GAAAATAAAG TGGCGCTTGC TGACAACGCG TTGTTACCTA AACTTGACCT TACCGCCTCT ATCGCCAGAG ATGTGGGGGC GGGTTCACAA ACCCTTGAAG GTACAGAAAC AAAAGTTGGG TTGTCTTTTT CTTACCCTTT GGGTAACAGA AAGGCCAAAG CGGAACGTGC ACAGCTTCAG TCAAAGCAAC GAGAGCTGGC GCACAAACTC ACGTCTACCG AGCAAGCAAT AGCGCAACGC TTTGAACAAG CGCTGGTGTA TTGGGGGCAG GCAAAAGACA TTGTATCGCT GCAAAGCGAA AACGCTGCAT TAGCCAAAAC TTTATCTAAG GTAGAGAAGA CGCGCTTCGA TGCTGGCGAC AGTGATATGT TTGTTTTAAA TGCCCGTGCT CAAAACGAAA TTAAAGCGAA GATGAAAGAG ATCAAAGCCA GGGTAGATTT GTTAAAAGCA GAACTGATGC TATATAAAGA AGCCGCTATG CTTTATTCAT TTAATAAGTA G
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Protein sequence | MVARSFISLL LALALLGSVS SAKVLAQSQT TQPAPSIEGL IESMVNYHPY VLAINEGNYQ AAAELEIARS SFDPFIEQKT KSRVSGYYDG TNLTQRFTNP IEDYNASVFG EYRIAGGDFP SYEGYYDTLS GGEASVGIAM SLLQNREIDK RRTALRNAGL ASSQWQALAS SLINDFVYKG VSEYIAWYES ALQIDAVTEL LNTAFEREKA LVTRVEKGDL ASIVLTEFKA NLLQQRLTLA ELKQKRDMHA QMLSFYWRSP SGDMQAVKSD KPPKDINWPY WVGNGQLVTL RNALREHPEL DVMKLEQQVV ENKVALADNA LLPKLDLTAS IARDVGAGSQ TLEGTETKVG LSFSYPLGNR KAKAERAQLQ SKQRELAHKL TSTEQAIAQR FEQALVYWGQ AKDIVSLQSE NAALAKTLSK VEKTRFDAGD SDMFVLNARA QNEIKAKMKE IKARVDLLKA ELMLYKEAAM LYSFNK
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