Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00576 |
Symbol | |
ID | 6777023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 611040 |
End bp | 611582 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642754011 |
Product | hypothetical protein |
Protein accession | YP_002124888 |
Protein GI | 196155399 |
COG category | [S] Function unknown |
COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCATTTT TTTCCAAATC GCTAAAACCG TTATTTATCG TCACAGGCTT ATTTTCTTTA AGCTTATCTG CGCTTTTTAG TGCTCATGCT AATGAACACG AAAACAAACA TCAACATGAC AAGCAGCATG TACACAATGA GCGCGCTGAC GTAATGGTGA TGAACGGTTA CGCCAGAGCA ACATTTGCCT TAGCAAAAAC CGGTGCGGTG TACTTTACTT TGCATAACCA AAGCGACAGC GACAAAACCC TTGTTTCAGT GTCGGTGGCT AAAGAGGTCG CAGACGAAGC GCAAATTCAC ACGACCGTTA TGGAAGGCGA CATGATGAAA ATGCGCGAGC TAACGGAAGG TGTAAAAATC AAGCCCGGTG AAATGGTGGC GTTTAAATCA GGCGGAAACC ACATAATGCT ACTAGGGTTA ACAAAGGGAT TGGCAGAAGG AAGTAATATT CCCATCACGT TATCGTTTGA TAATGGGAGT GAACTCAAGC TGGTATTACC CGTCAAAAAA GACGAAGCAA AAGGGCATCA CCACCATCAT TAA
|
Protein sequence | MSFFSKSLKP LFIVTGLFSL SLSALFSAHA NEHENKHQHD KQHVHNERAD VMVMNGYARA TFALAKTGAV YFTLHNQSDS DKTLVSVSVA KEVADEAQIH TTVMEGDMMK MRELTEGVKI KPGEMVAFKS GGNHIMLLGL TKGLAEGSNI PITLSFDNGS ELKLVLPVKK DEAKGHHHHH
|
| |