Gene MADE_00576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00576 
Symbol 
ID6777023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp611040 
End bp611582 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content43% 
IMG OID642754011 
Producthypothetical protein 
Protein accessionYP_002124888 
Protein GI196155399 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTTT TTTCCAAATC GCTAAAACCG TTATTTATCG TCACAGGCTT ATTTTCTTTA 
AGCTTATCTG CGCTTTTTAG TGCTCATGCT AATGAACACG AAAACAAACA TCAACATGAC
AAGCAGCATG TACACAATGA GCGCGCTGAC GTAATGGTGA TGAACGGTTA CGCCAGAGCA
ACATTTGCCT TAGCAAAAAC CGGTGCGGTG TACTTTACTT TGCATAACCA AAGCGACAGC
GACAAAACCC TTGTTTCAGT GTCGGTGGCT AAAGAGGTCG CAGACGAAGC GCAAATTCAC
ACGACCGTTA TGGAAGGCGA CATGATGAAA ATGCGCGAGC TAACGGAAGG TGTAAAAATC
AAGCCCGGTG AAATGGTGGC GTTTAAATCA GGCGGAAACC ACATAATGCT ACTAGGGTTA
ACAAAGGGAT TGGCAGAAGG AAGTAATATT CCCATCACGT TATCGTTTGA TAATGGGAGT
GAACTCAAGC TGGTATTACC CGTCAAAAAA GACGAAGCAA AAGGGCATCA CCACCATCAT
TAA
 
Protein sequence
MSFFSKSLKP LFIVTGLFSL SLSALFSAHA NEHENKHQHD KQHVHNERAD VMVMNGYARA 
TFALAKTGAV YFTLHNQSDS DKTLVSVSVA KEVADEAQIH TTVMEGDMMK MRELTEGVKI
KPGEMVAFKS GGNHIMLLGL TKGLAEGSNI PITLSFDNGS ELKLVLPVKK DEAKGHHHHH