Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00550 |
Symbol | |
ID | 6777906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 581070 |
End bp | 582113 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642753982 |
Product | ribosome-associated GTPase |
Protein accession | YP_002124862 |
Protein GI | 196155373 |
COG category | [R] General function prediction only |
COG ID | [COG1162] Predicted GTPases |
TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.582622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAA AACCAAAACT TACACAACGA CAGAAACGAC AAGTTGCAGC AAACAGAAGC AAACGCTTGC GTGAAAAGCA CGGCGCTAAA GATGCTTCGA GTCTGGACGA AAGCGCGTTA GAGAGCGGTA CTGTAATTGG CCGCTTCGGC AAACATGCCG ATGTTGAAGA TACCAATGGC GAAGTTTCCC GCTGCCATAT TCGCCGTACA GTCGACTCTG TAGTGTGCGG AGACAAAGTC TTTTTCAGCA AAGGGGATGA TGCTGAGTCG GGGGTAAGAG GTGTTATCGA AATAGTAAAA GACAGGCACT CCGTGCTCAC TCGCCCCGAT TATTACGACG GTATCAAACC CATTGCCGCG AATATCGACC GTATTATTGT GGTTAGCTCT ATTTTACCTT CTCTTTCACT GAATATAATC GACCGCTATT TGGTGGCCTG TGAAGATATT GGCATTACGC CACTTATTGT ACTTAATAAA GTAGAGCTGC TTAGCGATGA AGAACGCGCA ACCGTCACAG AGCAGCTTAA AACCTATGAA AAACTAGGCT ACGAAGTGCT GTTTACCAGC TGTAAAACTG GCGAGGGTAT TAATACACTT AACGAATACC TTAATGATAA TATCAGCGTT TTCGTGGGGC AGTCGGGCGT TGGTAAATCG AGCCTTATTA ACCAGGTTCT GCCAGATGCC GATGAATTAA CCGGTGATAT CTCAGATAAC TCAGGGCTGG GTCAACACAC CACCACCGCT GCTAAACTGC TTCATTTACC GGCTGGGGGT GATTTAATTG ATTCTCCAGG AGTACGTGAG TTTGGCCTGT GGCATATTCC CGTTGAGCGT ATCACATGGG GTTTTATTGA GTTTAGAGAC TATTTAGGCG GCTGCAAATT TCGCGACTGC AAGCACTTAA ACGATCCGGG CTGCTTGTTA AGAGAAGCGG TTGAAGAAGG GAAAATCAGT GCAGAACGCT TTGACAGCTA CCACCGAATA TTAACCACGA TGGAAGAGCA GCGTCCTAGC CATAGTCAGC CCCCAGGTGC ATAA
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Protein sequence | MAKKPKLTQR QKRQVAANRS KRLREKHGAK DASSLDESAL ESGTVIGRFG KHADVEDTNG EVSRCHIRRT VDSVVCGDKV FFSKGDDAES GVRGVIEIVK DRHSVLTRPD YYDGIKPIAA NIDRIIVVSS ILPSLSLNII DRYLVACEDI GITPLIVLNK VELLSDEERA TVTEQLKTYE KLGYEVLFTS CKTGEGINTL NEYLNDNISV FVGQSGVGKS SLINQVLPDA DELTGDISDN SGLGQHTTTA AKLLHLPAGG DLIDSPGVRE FGLWHIPVER ITWGFIEFRD YLGGCKFRDC KHLNDPGCLL REAVEEGKIS AERFDSYHRI LTTMEEQRPS HSQPPGA
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