| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00515 |
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| Symbol | |
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| ID | 6777351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 545479 |
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| End bp | 546546 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642753947 |
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| Product | putative Type IV pilus biogenesis protein PilM |
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| Protein accession | YP_002124827 |
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| Protein GI | 196155338 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGC TGTTTAAAAA CAAGCTGCCA CCCATTGTGG GCTTAGATAT AGGCACGCGT
CAAATAAAAG CGGTGTGGTT AGAGCAATCG AAAGAGGGTT TTGTCCTTCA AGGGTATGCT
TGTGAACCCA TTAATAAAAT TGCTTTTTCT GAACGCGATA TTAAAGATTA TGAATCGGTC
AGTATCGCCT TGAAAAAAAT TCGAAAATCA CTGAAAACCA AGTTAAAGCT GGCCAATGTG
GCGGTCGCGG GGACCTCAGT CATCAGTAAA ATCGTTTACA TGGAACCCGA GCAAAACGAT
TACGATTTAG AAAATCAGAT TGAAATTGAG GCCGACAGCC TTATCCCCTA CCCACTTGAA
GAAGTATATT TAGACTTTGA AGAGATGGGG CCAAGTGCCA CGCACACCGG TAAAGTAAAC
GTACTGCTAA CTGCGGCACA TAAAGATCTG GTAGACAGTC GACTATTGCT AGCCAGAGAA
GCTAATTTCG AGCCTAAAAT TGTCGATATG GAAAATTACG CCATCGGCAA TGCACTGGAT
TTTTTTCATA CGCCTCACGT AGAAGATGAA CCCCTTTGTT GCGTTAATGT GGGGGCGTCT
TTGCTCCAAA TATGTGTAAT TAAAAACGGC GATGTTATTT ACACGAAAGA GCACGCGTTT
GGCCTAAACC AGTTAGTCAA TGATATCAGC GCAATTCACA TGGTTGAGCG CGAAACAGCA
GAACGCCAGC TTCTTGATGG CACACTGTCA GGAAACTGGG TTGAAGATAC ACTCCCCATT
TTTGCTGCCA ACCTTCAGCA GAACATCAAT CGCGCTATAC AAATGTACAT GAGTACGTTA
CACGCAGAGC GCCCAACCAA AATACTCTTT AGCGGTGGAG CGGCGACGAT AGCACCTCTT
GTCGATATCC TAAAACAAGA CTTAGGCCTT GATGTGAATT GCTTTAATCC CTTTAGCAAT
ATGACAATTA ACCCTAAACT TGATATTACT CGACTTAACA AGATAGCGCC TCAGCTTGCG
ATTGCCGCAG GGTTGGCGAG CCGGAGCTTT ACGCCATGGC ACATGTAA
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| Protein sequence | MKSLFKNKLP PIVGLDIGTR QIKAVWLEQS KEGFVLQGYA CEPINKIAFS ERDIKDYESV
SIALKKIRKS LKTKLKLANV AVAGTSVISK IVYMEPEQND YDLENQIEIE ADSLIPYPLE
EVYLDFEEMG PSATHTGKVN VLLTAAHKDL VDSRLLLARE ANFEPKIVDM ENYAIGNALD
FFHTPHVEDE PLCCVNVGAS LLQICVIKNG DVIYTKEHAF GLNQLVNDIS AIHMVERETA
ERQLLDGTLS GNWVEDTLPI FAANLQQNIN RAIQMYMSTL HAERPTKILF SGGAATIAPL
VDILKQDLGL DVNCFNPFSN MTINPKLDIT RLNKIAPQLA IAAGLASRSF TPWHM
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