| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00332 |
|---|
| Symbol | |
|---|
| ID | 6775442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 357225 |
|---|
| End bp | 359342 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642753761 |
|---|
| Product | FAD linked oxidase, N-terminal |
|---|
| Protein accession | YP_002124644 |
|---|
| Protein GI | 196155155 |
|---|
| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases
[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTATC AACAGACAGC ACTAATATCA GGCGCTAGCT CTGGTATAGG ACTTGCGCTT
ACAAAAGAGC TTCTACTCTC CTACCCTTTT ATCCAGATCG TAGCACTTTG TAGAAATCCA
GAAACTTTAC AACAGCTTAA AAGGTCTTAT GGGGATAGGG TCAGAATCGA GTGTATCGAT
TTCACTAATA GGGATTGTAT TAAAAGCCTT CAAAACGTTG TCAATCAGCA TACTCACTTT
AGCTACCTGA TCCATTGCGC AGGTGTTGTC ATGCCATTTG GAGATATTAG CAACGTCGCC
CCTGATGAGT GGGAGGCAAC CCAATGGATA AATGTCGAAG TACCTCGCCT TTTAACGCAG
ATATGCTTAA AAAAATTTAG TCATAGCCGC GTGATGTTTT TAACCAGTGA TTTGCCAGTA
CAACCCGTTG CTGGCGCCTC AGCTTATTGT GTGAGCAAAG CATCATTAAA TATGCTGTGC
CAGTGTTTTC AACTTGAAGT CGATAACGAT ATTGCTGTTT TTACAACTGT GGCTCCTGGA
AACGTCGACA CCAAAATGCA GGAAACGATA AGGCAAGCCT CAAATCGAGT TTTGCCTGCA
TCGGAGTTAA TGCGCAGTAT GTTTTCGGCA AACAAGCTTT TACCTCCCCG ATTAGTTGCA
CAATATCTGC GACAATTGCT AAGCGATGTC ACGCCAAACA CTTTTGGAAG TCGTAGTTGG
AATTTACTAG AGAGTATTGT TGAAGTTTCA CCTGCAAAAC AGACAAAAAC TGATTCAATT
GACACGCGTG CTACTGAAAC AAGCCTGGTA GAACTGGCAA GTCTTGTTGG CGGCGCATTC
TGGTCACCGG GTAGTGCAGA ATATGAAGAA AACAGGAAAG TATTCAATCA AGGTGTTTCG
CGTTTTCCGT TAGTAATTAT TCAACCTAAG ACAAAGACCG ATATTATACA CATTGTCAAA
TGTGCAAAGC AGTTGCGCTT ATCCATTACA ATTAAGGGTC AAGGGCATGG TGTAAGTGGC
ATGTCGGTCC TTAACAATGC AATTGTAATT GATATGTCGA TGTTTAAAAC AACTGTACTG
AATGTTGATA AGAGCTCAGT AAACGTCGGC GCAGGCGTCA AAAATAGTGA ATTGGACCAT
TTTCTAGCGC AACACAATAA AGTGGTTCCT TTGGGTACCT GTCCCGATGT TGGTGTTGTC
GGCGCAACAT TGGGAGGGGG GATCGGTTTT TTGTCCAGAA AGCTTGGTTT GAGTTGCTAC
AATGTGCTCG CGTTTGGATT GATAACTGCT GACGGTAAAG TAAGACAAGT GACAGAATCC
CAACATGCGG AGTTATTTTG GGCATTAAAA GGGTGTGGCC ATGGTCAATT TGGCGTTGTG
ACCGATATCA CGTTTAAATT ACACGATGCC CCCCAAAATA TTGATGGCCG AATACTCGAG
TGGCCATTAT GTCACGCACG ATCTATTCTT AGGCAATATA GCAAAACAGT GCTCAGTGAT
AACAGATCGG TTTTTCTATA TGCATATCTC TCGCGATCGA TGGAAGATAA AGCTCGAATT
TCGATAATGG GGTTTAGTGA GGACTCGGTG CAGGGTTTGG ATTCTGTAGC CAAATGGCAA
GACGGTGCCA AATTGTTAAG TAGGCGGTCG CAATACGTTG AATGCCAATC CAATGACTAC
GATAGTGATC TGAGTTTGTA TTGGCGAAAT GGCATAATTG AAGGCGAGCT ATCAGACGAA
TTCATTGAAA CACTTTTATC GTGTTACCGA GCTTGTCCGG GAAATTCAGG TGGATTTATG
CTAGACCCGC TTTGTGGCGC TATTCAGGAT GTAAACGCTG ACGATTCGGC ATTTATTCAC
CGCAACGCTT CTTTCGTCTG TAGTATCACA GGGATCACTC AAGCTGAATG TGACGATACT
GAAGTTATCG ATTGGGTGAA TAAATCTTTC GATTTGCTAT TACCGTTTTT TAATGGTCAT
TCTTACCAAA ATTATGACAT GGGGAATGGG TCGTCACTTG CTCTTTACTA CGGCCAACAC
ACAGCTCGTT TGAAATTATT AAAACAACAA TACGATCCTA CTGGTCTGTT TATGAGCTCT
CTTCTGCGCC CTGACTAA
|
|---|
| Protein sequence | MLYQQTALIS GASSGIGLAL TKELLLSYPF IQIVALCRNP ETLQQLKRSY GDRVRIECID
FTNRDCIKSL QNVVNQHTHF SYLIHCAGVV MPFGDISNVA PDEWEATQWI NVEVPRLLTQ
ICLKKFSHSR VMFLTSDLPV QPVAGASAYC VSKASLNMLC QCFQLEVDND IAVFTTVAPG
NVDTKMQETI RQASNRVLPA SELMRSMFSA NKLLPPRLVA QYLRQLLSDV TPNTFGSRSW
NLLESIVEVS PAKQTKTDSI DTRATETSLV ELASLVGGAF WSPGSAEYEE NRKVFNQGVS
RFPLVIIQPK TKTDIIHIVK CAKQLRLSIT IKGQGHGVSG MSVLNNAIVI DMSMFKTTVL
NVDKSSVNVG AGVKNSELDH FLAQHNKVVP LGTCPDVGVV GATLGGGIGF LSRKLGLSCY
NVLAFGLITA DGKVRQVTES QHAELFWALK GCGHGQFGVV TDITFKLHDA PQNIDGRILE
WPLCHARSIL RQYSKTVLSD NRSVFLYAYL SRSMEDKARI SIMGFSEDSV QGLDSVAKWQ
DGAKLLSRRS QYVECQSNDY DSDLSLYWRN GIIEGELSDE FIETLLSCYR ACPGNSGGFM
LDPLCGAIQD VNADDSAFIH RNASFVCSIT GITQAECDDT EVIDWVNKSF DLLLPFFNGH
SYQNYDMGNG SSLALYYGQH TARLKLLKQQ YDPTGLFMSS LLRPD
|
|---|
| |