| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00199 |
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| Symbol | |
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| ID | 6776457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 215047 |
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| End bp | 216327 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642753627 |
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| Product | response regulator/GGDEF domain protein |
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| Protein accession | YP_002124511 |
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| Protein GI | 196155022 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAAC ACGTGCTGAT CCTTGAAAAT GGTGAAGGCA ACCTTGAACT GATTGCGAAA
TTAGTCCGTC GCGCGGGCCT TACGCCCGTG GGCGCGACCT CATTAACAGA AGGTAAGGCG
CGTTTTTCGC AAAAAGATGC GCCAGAAACG TTTCTGTGCG CCATTGTAGC GTATTCTCTA
CCTGATGCCC GTAAAGGCGA GGCTATCGAC TTTACGGTGA AATCCTTCAT CCCCACCATA
GCCACTACCG AGAGTTTGGA CAGCGCCATT CGCGACAAAG TCCTCGAACG TGATGTTGTC
GATTATATCC CTAAAGAAAA TTCCCAAAAC TACGATTACT TAAATCGTCT TATTGGCCGA
CTCGAAAAAA ATAAGTCTAC CGGCGTAATA GTAGTAAGTA CTAATCGAGT ACTAAGAACG
AAAACGGTCT CACTGCTTCA GCGCCATAAC TTTATCGCTT TTGAATGTTT AACCGCCACC
GATGCAATGC AGTGTTTGTC GGAGCACAAT AATGTGCGCC TGGTTATTAC CGACAACACA
CTTCCCGACA TGACAGGGAC ACATTTTGTT TCTAGTCTTC GCAAAGCCTT TTCGAAAGAG
CAGCTAGCTA TTATGGGAGT AGCCGGAGGC AAAGGTATGT TGATGTCGGC CCACTTCATC
AAAAGCGGCG CAAATGACTT TTTGCGTGTG CCTTACTGCC ACGAAGAGTT TTTATGCCGG
GTTATGCAAA ACGTTGAGTA TATTGAAAGT GTGGAAGAGA TTCGTCGCGT TGCCAATACA
GACTATTTAA CGGGGCTGCC CAATAGGCGT CATTTCTTTT ACATGGTAAC GGTTCAGCAC
CAAAAGCTGC TAGAAAATCA TGCGCTAGCC CTTATCGACC TAGACTTTTT TAAATCAATC
AATGATACCC ATGGTCACGA TGCGGGCGAT ATCGTACTAA AGGCCATAGC AGCGCTAATT
GAATTTTATT TCCCTGACGA AATTATTTCT CGATTTGGCG GCGAAGAATT CTGTATTTAC
ATGCCGTCAA TAACACTAGA GAACGCCTGC AAACGCTTAG AAGATTTCAG AAAAGTGGTA
GAAGCCGAAG TTATTCAACT TCCTAAGACC GATATCAAAG TTACCTGCAG CATTGGCGTG
AGTGGCACCC ATACCCAACG GGTAGATAAG CTTTTAAGCT TAGCCGATAA ACAGCTTTAC
GCGGCAAAAC ACGATGGCAG AAACCAAGTA AAGTGCGAAG CGCCAGGGGC GTCTTATCAA
GAACAAGCTT CACTGCTTTA G
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| Protein sequence | MQQHVLILEN GEGNLELIAK LVRRAGLTPV GATSLTEGKA RFSQKDAPET FLCAIVAYSL
PDARKGEAID FTVKSFIPTI ATTESLDSAI RDKVLERDVV DYIPKENSQN YDYLNRLIGR
LEKNKSTGVI VVSTNRVLRT KTVSLLQRHN FIAFECLTAT DAMQCLSEHN NVRLVITDNT
LPDMTGTHFV SSLRKAFSKE QLAIMGVAGG KGMLMSAHFI KSGANDFLRV PYCHEEFLCR
VMQNVEYIES VEEIRRVANT DYLTGLPNRR HFFYMVTVQH QKLLENHALA LIDLDFFKSI
NDTHGHDAGD IVLKAIAALI EFYFPDEIIS RFGGEEFCIY MPSITLENAC KRLEDFRKVV
EAEVIQLPKT DIKVTCSIGV SGTHTQRVDK LLSLADKQLY AAKHDGRNQV KCEAPGASYQ
EQASLL
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