Gene MADE_00164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00164 
Symbol 
ID6777923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp175814 
End bp176848 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content48% 
IMG OID642753592 
Productputative ABC-type transport system, ATPase component 
Protein accessionYP_002124476 
Protein GI196154987 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAGTG TAAGTAATTT GTCAGTGAAT TATGGGTCTA CCCGCGTAGT CGACAAGTTA 
AATCTAGAAC TGGGGCAAGA CGAAATTCTC ATGTTGGTTG GGCCGACAGG GTGCGGTAAA 
ACCACAATCT TACAAGCGCT CGCGGGGCTT ATTCCTATTT CTGAAGGCAC CATGCGTTTA 
GGTAAATGGG AAAGTAGTGC AAATAAGCAC ATTCCGCCTG AAAAACGCAA CGTGGGTATG 
GTGTTTCAAG ATTTTGCACT TTTTCCTCAC TTAACTGTTC AGCAAAACGT GTGCTTTCGT 
TTAAAAGATA CATCCCTTGC CGATCACTGG CTTACCTTAC TCGGCCTAGA TAATTTCCGC 
GATGTTAAGC CAGCGCGACT TTCCGGCGGT CAGAAGCAGC GCGTAGCCTT GGCGAGAACC 
TTAGCCCACG AACCGGCCTA TGTATTACTT GATGAACCGC TTTCAAACCT AGATGCCGCG 
TTAAAAGACA GCCTGCGTTG GGAAATTCGC GATGCGCTTA AGAAAGCGGG TGTGCCCGCT 
ATCTGGGTTA CCCACGACCA AGAAGAAGCG CTTAGCGTCG GTGATAGGGT AGGTATTTTA 
AATAAAGGCG TGTTAGAGCA GTTAGACACC CCGGAAGCCT GTTATTCATC ACCTGCCAGC 
CGTTTTGTTG CGCGCTTTAT GGGCGAAGCA AGCTTCTTGA GCGCAACATT TGATGCTAGT 
GAAGCAGATA CAGACAAAAC GGTCGTTACT GAAATTGGCA AGGTGCCAGG CACGCCGCTT 
CAAGGTGCTA ACGGTAATGT AGATTTACTC GTGCGCCCTG ACGATTTAAG CCTAGATGCC 
ACGGTTAGTG AGACCAATTG TACGGTTGAA TGGGTGCGCT ATGAAGGCGA AAGCCGATTG 
TATGCGGTTA TGCTAGATAG CGGTGATGAA CTTAAAGTAC GTGTAAGCCA CGAAAACGCG 
ATTAAGCCCA GTACCCGCGC TTTTGTTCAG TTAATTACTA CGCACCCGCT AGCCGTGTTT 
CCTAAAAACG TTTAG
 
Protein sequence
MLSVSNLSVN YGSTRVVDKL NLELGQDEIL MLVGPTGCGK TTILQALAGL IPISEGTMRL 
GKWESSANKH IPPEKRNVGM VFQDFALFPH LTVQQNVCFR LKDTSLADHW LTLLGLDNFR 
DVKPARLSGG QKQRVALART LAHEPAYVLL DEPLSNLDAA LKDSLRWEIR DALKKAGVPA 
IWVTHDQEEA LSVGDRVGIL NKGVLEQLDT PEACYSSPAS RFVARFMGEA SFLSATFDAS 
EADTDKTVVT EIGKVPGTPL QGANGNVDLL VRPDDLSLDA TVSETNCTVE WVRYEGESRL 
YAVMLDSGDE LKVRVSHENA IKPSTRAFVQ LITTHPLAVF PKNV