Gene M446_5852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5852 
Symbol 
ID6129843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6435441 
End bp6436118 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content79% 
IMG OID641645959 
ProductHAD family hydrolase 
Protein accessionYP_001772573 
Protein GI170743918 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGC GCGGCGCGGG GCCGCCTCCG GCGGGGCCCT ACGGCCTCGT CCTCCTCGAT 
TTCGACGGGA CGCTCGCCGA CAGCTTCCCG TGGTTCTGCC GCGTTCTCGA CGGGGTGGCC
GACCGCTACG GCTTCCGCCG GGTCGCGCCG GGCGAGGTCG AGGATCTGCG CCGCCTCGGC
GCCCGGGCGA TCCTGCATCG CCTGGAGGTC CCGGCCTGGA AGCTTCCCCT CATCGCGCGG
CACATGCGCG CCCTCGCGGC CCGGGACGCG GAAGAGATCG GGCTGTTCCC GGGCATCCCC
GGCCTGCTCG CCCGCCTCGC GGCCGCGGGC CTGCGCCTCG CCGTCGTGAC CGCCAACCGC
GAGGCGACGG TGCGCCGGGT GCTCGGTCCC GAGAGCGCCG CCCGCATCGA CGCCTTCGCC
TGCGGCGCCC CCCTGTTCGG CAAGGCGCGC CGCTTCCGCG CCCTGGTGCG CGCGGGCGGC
CTGCCGCCCG AGCGGGTGAT CTGCCTCGGT GACGAGCTGC GCGACGCGGA GGCCGCCGCC
GCCTGCGGCC TCGCCTTCGG GGCCGTCGCC TGGGGCTACA CGCGGCCCGA CGCGCTGGCG
GCGCTGCGGC CCGCCCACCT CTTCGCGACG CCCGAGGCGG TCGCCGAGAC CCTGGCGCCG
CGCCGGGCCG CGGCCTGA
 
Protein sequence
MTRRGAGPPP AGPYGLVLLD FDGTLADSFP WFCRVLDGVA DRYGFRRVAP GEVEDLRRLG 
ARAILHRLEV PAWKLPLIAR HMRALAARDA EEIGLFPGIP GLLARLAAAG LRLAVVTANR
EATVRRVLGP ESAARIDAFA CGAPLFGKAR RFRALVRAGG LPPERVICLG DELRDAEAAA
ACGLAFGAVA WGYTRPDALA ALRPAHLFAT PEAVAETLAP RRAAA