| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5376 |
|---|
| Symbol | |
|---|
| ID | 6131785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 5904521 |
|---|
| End bp | 5905570 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641645505 |
|---|
| Product | plasmid partitioning protein RepB |
|---|
| Protein accession | YP_001772127 |
|---|
| Protein GI | 170743472 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins
[TIGR03454] plasmid partitioning protein RepB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.224219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.37065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCC GCAAGGACAC GCTCCGCGCC GCCCTCACGG CCCGCGCCCG CGAGTTGCCA
AGTGGCAACC CGGCACCGGC CGCCCCCGCC GCGCCGGCCG AGGCGCCGGC GGCCCCGCCG
CCCGAACCGG TCCGGACCGC GGTGCGCTCC GGCGCCGTGG GGGCGATGGG GCGGGCGCTC
GGCCGCATCG CCACCGCCGC CGAGGAGGCC CGCGCCATGG TGGCGGCGGG AGACAAGGTG
GTGGAGATCG ATCCCGGCCT CGTCGACCCC TCCTTCGTCG CCGACCGCCT CGGGATCTCG
CCGGAGGACC ACGCCGCCCT GACGGAGCAG GTCCGGACCC GCGGCCAGCA GGTGCCGATC
CTGGTGCGGC CCCACCCGAC CCAGCCGGGA CGCTACCAGG TCGCCTACGG CCACCGCCGC
CTGCGGGTCG CCGCCGAACT CGGGCGCCCG GTCCGCGCGG TGGTCAAGGC GCTCAGCGAC
GAGGACCTCG TCGTCGCCCA GGGCCAGGAG AATTCCGCCC GCACCGACCT GAGCTACATC
GAGCGCGCCG CCTTCGCGGT CACGCTCGAG GATCGCGGCT TCGCCCGCAG CGTCATCATG
TCGGCCCTGT CGATGGAGAA GTCCCAGCTC TCGCGCCTGA TCGCCATCGG CCGCGCCGTT
CCCGCCCGGG TACTGGCCGC GATCGGCCCC GCCCCGCGCA CGGGCCGGCC CCGCTGGGCC
GCCCTGGTCG AGGCGCTGGC GCGGCCCGAC GCGGACCGGA TCGTCGAGGC CGCGCTCGCG
GCCGAGGACT TCGCCCGCGA GGAATCCGAC GCGCGCTTCG CCCGGCTCCT CGCCGCCCTC
ACGGCGCCGC GCTCCGAGGC GCGCGGGGTC TCCGTCACCT CCTGGACCAA CCCGGCCGGG
CGCGCGGTGG TGCGCATCGA CCGCTCCGCC CGGCGCACCC AGCTCACCGT CGACGAGGGA
GCCGAGCCGG AATTCGGCGC CTTCCTGGTC GAGTCGCTGC CCGACCTCTA CGCGCGGTTC
ACGGCCCGCA AGTCCGGCCG GGCGGAGTGA
|
|---|
| Protein sequence | MTTRKDTLRA ALTARARELP SGNPAPAAPA APAEAPAAPP PEPVRTAVRS GAVGAMGRAL
GRIATAAEEA RAMVAAGDKV VEIDPGLVDP SFVADRLGIS PEDHAALTEQ VRTRGQQVPI
LVRPHPTQPG RYQVAYGHRR LRVAAELGRP VRAVVKALSD EDLVVAQGQE NSARTDLSYI
ERAAFAVTLE DRGFARSVIM SALSMEKSQL SRLIAIGRAV PARVLAAIGP APRTGRPRWA
ALVEALARPD ADRIVEAALA AEDFAREESD ARFARLLAAL TAPRSEARGV SVTSWTNPAG
RAVVRIDRSA RRTQLTVDEG AEPEFGAFLV ESLPDLYARF TARKSGRAE
|
|---|
| |