| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5126 |
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| Symbol | fliF |
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| ID | 6130660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 5630271 |
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| End bp | 5631890 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641645261 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001771886 |
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| Protein GI | 170743231 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0640822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAACCGG TTCTCGATCT GATGGCGAAG TTCGGGCCGG CACGCCTCGC CGCCATGGGC
GCGGTCACGC TCGTCCTGGT GGGCTTCTTC GCGTTCGTGA TCCTGCGCGT CTCGCGGCCC
GAACTGGGCG TGCTCTACGC GGACCTCTCC CTGCAGGATG CGGGCGCGGT GATCCGGGAC
CTGGAAGCGC GGGGCATCCG CTACGAGACC CGCGGCGATC TCGGGCAGAC GATCCTGGCG
CCTCGTGCCG ACCTGCCCCG CCTGCGCATG GACCTCGCCG GCAAGGGCCT GCCGAGCGCG
GGCGGCGTCG GCTACGAGCT CTTCGACAAG GGCGACGCCT TCTCGACCAC GACCTTCGTC
CAGAACGTCA ACCACCTGCG CGCCCAGGAG GGGGAACTCG CCCGCTCGAT CCGGGCGATC
GGCCGCGTGC AGGCGGCGCG GGTCCATCTC GTCATCCCGG AGAAGCGGCT GTTCAACCGC
GACCGGGAGC TTCCGAGCGC CGCCATCGTG CTCAAGCTCG CGGGCGACCT CGATCCCGGC
CAGGTCCGGG CGGTGCGCCA CCTCGTGGCC TCCTCGGTGG AGGGGCTCAA GCCCGAGAGG
ATCTCGATCG TGGACGAGCG CGGGCGCCTC CTGGCGGACG GGGCCGGGCG CGACGACGCG
CAGGCCGTCC TCGGCCTCGA CGAGCGGCAG GCCAGCCTGG AGCAGCGCCT GCGCGCGCAG
GTCGAGGGGA TCGTGGCGGG CATCGTCGGG GCGGGCCGCG CCCGCGTCCA GGTCGCGGCC
GAGCTCGATC CCAGCCGGAT CGAGAGCCGC TCGGAGAGCT TCGATCCCGA GAGCCGGGTC
GTGCGTTCGA GCCAGACCCG CTCGGAGACC TCGGCCTCGC AGGGGCCCGG CGAGACCGGC
GTCAGCGTCG GCAACGAGCT GCCGGGCGCC CGCGAGACCG CCCAGGCGAA CGGCACCCGC
GAGACTTCGA ACAAGAACGA GGAGACGACG AATTACGAGA TCTCCCGGGT CACGCGCACC
GAGGTCAACG AGGGCGGCCG GATCAAGCGC CTCTCGGTGG CGGTCGTCAT CGACGGCAGC
TACCAGCCGG GGCCGGACGG CAAGCCGGTC TACGCGCCCC GCAGCCAGGA GGAGCTCGAC
CGCATCACCG CCCTGGTGCG CACGGCGGTC GGCTACGACA AGGGCCGGGG GGACCAGGTC
GAGGTCGCCA ACCTGCGCTT CGCCGACACC GCCGTCCCGG CCGAGCTTCC GGAGGAGGGG
CTCCTCGCCT CGCTCCTGAA GCCCACCAAG GAGGAGGTGC TGCGCCTCGT CGAACTCGCC
GTCCTGGCCC TGCTGACGCT CGTGGTGGTG CTGGCGGTCA TGCGCCCGCT GCTGCGCCGC
GTGCTCCCCG CCGAGGCCCC GCCCGAGCCG GCCCTGGCCG CCGTCGCGGT CCTGCCGGCC
GCGGGCGCGG AGGGGGAGGG GGCGCCGGCC CTGCCCGAGA GCCCGGCGCG CCAGCTCGTC
GAGTTCGCCA AGATCAACGG CAAGATCCAG GCCGAGACGA TCGCGCGCGT GGCCGAGATC
GTGCGCCAGA ACCCGGTCGA GACCGCCGAG GTGCTGCGCG GCTGGATCCA GGACCGCTGA
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| Protein sequence | MQPVLDLMAK FGPARLAAMG AVTLVLVGFF AFVILRVSRP ELGVLYADLS LQDAGAVIRD
LEARGIRYET RGDLGQTILA PRADLPRLRM DLAGKGLPSA GGVGYELFDK GDAFSTTTFV
QNVNHLRAQE GELARSIRAI GRVQAARVHL VIPEKRLFNR DRELPSAAIV LKLAGDLDPG
QVRAVRHLVA SSVEGLKPER ISIVDERGRL LADGAGRDDA QAVLGLDERQ ASLEQRLRAQ
VEGIVAGIVG AGRARVQVAA ELDPSRIESR SESFDPESRV VRSSQTRSET SASQGPGETG
VSVGNELPGA RETAQANGTR ETSNKNEETT NYEISRVTRT EVNEGGRIKR LSVAVVIDGS
YQPGPDGKPV YAPRSQEELD RITALVRTAV GYDKGRGDQV EVANLRFADT AVPAELPEEG
LLASLLKPTK EEVLRLVELA VLALLTLVVV LAVMRPLLRR VLPAEAPPEP ALAAVAVLPA
AGAEGEGAPA LPESPARQLV EFAKINGKIQ AETIARVAEI VRQNPVETAE VLRGWIQDR
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