| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4893 |
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| Symbol | mdoD |
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| ID | 6132290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 5372914 |
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| End bp | 5374470 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641645029 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_001771656 |
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| Protein GI | 170743001 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00109342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTCGACC GCCGCCGCTT CCTCGCCGCC GCCGCGCTCC TGGCCGGCGG CCTCCCCGCC
CGCGCGGCCG GCCTGCCGCT CGGGGCGCCG AGCCCCTTCG ACTTCGAGGC GCTGAAGGCC
CGCGCCCGCG ACCTCGCCGC CGCGCCCTAC CGGCCCCCGG CGATCCCCGA CCGGGAGGTG
CTGCAGGCGA TCGACTACGA CGCCCACGGC AAGCTGCGCT TCAAGCCCGA CCACGCCCTC
TGGGCCGAGG GCCCGGGCGC CTTCCCGGTG ACCTTCTTCC ATCTCGGCCG CTACTTCCAG
AAGCCGGTGC GGATGCACCT GGTCGAGGGG GGCGAGGCCC GCGAGATCGT CTACGTCCAG
GACGCCTTCG AGATGCCGGC GGATTCGCCC GCCCGGCGCC TGCCGCCGAA TCCCGGCTTC
GCGGGTTTCC GCTTCCAGGA GCGGCGCGGC GGCGCCCTCG ACTGGCGGCG CAACGACTGG
GTGGCGTTCC TCGGCGCCTC CTATTTCCGG GCGATCGGCG AACTCTACCA GTACGGACTC
TCGGCGCGGG GCCTCGCCCT CGACACCGTG ATGCCGGACC GGCCGGAGGA GTTTCCCGAC
TTCACTCATG TCTGGTTCGA GACGCCGGCG CCGGATTCCG ACACCGTCAC GGTGATGACG
CTCCTCGACG GCCCCTCGGT GGCGGGCGCC TACCGGTTCC GGATGCGGCG CGGCAAGGCC
GTGGTGATGG AGATCGAGGC GCGGCTGCAC CTGCGCCGGG ACGTCGGCCG CTTCGGGCTG
GCGCCGCTCA CCTCGATGTA CTGGTTCTCC GAGACGGCCA AGCCCAGCGC CGTCGACTGG
CGCCCCGAGG TGCACGATTC GGACGGGCTG GCCCTGTGGA CCGGGAGCGG CGAGCGCCTC
TGGCGGCCCC TGCGCAACCC GCCCCGGACC ATGGTCTCGG CCTTCGTGGA CGCGCGGCCG
CGCGGCTTCG GGCTGATGCA GCGCGACCGC CTGTTCGACC ATTACCAGGA CGGGGTCTAC
TACGACCGCC GGCCCTCGCT CTGGGTCGAG CCGCTCGGGG ATTGGGGCCG GGGCAGCGTG
CAGCTCATCG AGAACCCGAC CGACGACGAG ATCCACGACA ACGTCGTGGC CATGTGGGTG
CCGGAGGAGC CGGCCCGGGC CGGCTCCGTG CACGACCTCG CCTACCGGCT GCACTGGGTG
GCCGACGAGC CCTATCCGTC CGCGCTCGCG CGCTGCGTCG CGACCCGCGA GGGCAATGGC
GGGCAGGCCG GGACGGAGCG CCCGAAGGGC CTGCGCAAGT TCGTGGTGGA GTTCCTGGGC
GGGCCGCTGG CGCAGCTCCC CGCGGGCGTG AAGCCCGAGC CGGTGCTCAG CGCCTCCCGC
GGCAGCTTCC CGCTCGCCCG CACGGAGGCG GTGCCGGACG ACGTGCCGGG CCATTGGCGC
GCCGAGTTCG ACCTCGCGGT CACCGGGTCC GAGCCGGTGG AATTGCGGCT CTTCCTGCGC
CAGGGCGACC GCACGCTCAG CGAGACCTGG ACCTACCAGG TCATCCCGGC GGCCTGA
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| Protein sequence | MLDRRRFLAA AALLAGGLPA RAAGLPLGAP SPFDFEALKA RARDLAAAPY RPPAIPDREV
LQAIDYDAHG KLRFKPDHAL WAEGPGAFPV TFFHLGRYFQ KPVRMHLVEG GEAREIVYVQ
DAFEMPADSP ARRLPPNPGF AGFRFQERRG GALDWRRNDW VAFLGASYFR AIGELYQYGL
SARGLALDTV MPDRPEEFPD FTHVWFETPA PDSDTVTVMT LLDGPSVAGA YRFRMRRGKA
VVMEIEARLH LRRDVGRFGL APLTSMYWFS ETAKPSAVDW RPEVHDSDGL ALWTGSGERL
WRPLRNPPRT MVSAFVDARP RGFGLMQRDR LFDHYQDGVY YDRRPSLWVE PLGDWGRGSV
QLIENPTDDE IHDNVVAMWV PEEPARAGSV HDLAYRLHWV ADEPYPSALA RCVATREGNG
GQAGTERPKG LRKFVVEFLG GPLAQLPAGV KPEPVLSASR GSFPLARTEA VPDDVPGHWR
AEFDLAVTGS EPVELRLFLR QGDRTLSETW TYQVIPAA
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